| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4146 |
|---|
| Symbol | pfkA |
|---|
| ID | 5591649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 4135561 |
|---|
| End bp | 4136523 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640923248 |
|---|
| Product | 6-phosphofructokinase |
|---|
| Protein accession | YP_001460707 |
|---|
| Protein GI | 157163389 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02482] 6-phosphofructokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGA AAATCGGTGT GTTGACAAGC GGCGGTGATG CGCCAGGCAT GAACGCCGCA
ATTCGCGGGG TTGTTCGTTC TGCGCTGACA GAAGGTCTGG AAGTAATGGG CATTTATGAC
GGCTATCTGG GTCTGTATGA AGACCGTATG GTACAGCTAG ACCGTTACAG CGTGTCTGAC
ATGATCAACC GTGGCGGTAC GTTCCTCGGT TCTGCGCGTT TCCCGGAATT CCGCGACGAG
AACATCCGCG CCGTGGCTAT CGAAAACCTG AAAAAACGTG GTATCGACGC GCTGGTGGTT
ATCGGCGGTG ACGGTTCCTA CATGGGTGCA ATGCGTCTGA CCGAAATGGG CTTCCCGTGC
ATCGGTCTGC CGGGCACTAT CGACAACGAC ATCAAAGGCA CTGACTACAC TATCGGTTTC
TTCACTGCGC TGAGCACCGT TGTAGAAGCG ATCGACCGTC TGCGTGACAC CTCTTCTTCT
CACCAGCGTA TTTCCGTGGT GGAAGTGATG GGCCGTTATT GTGGCGATCT GACGTTGGCT
GCGGCCATTG CCGGTGGCTG TGAATTCGTT GTGGTTCCGG AAGTTGAATT CAGCCGTGAA
GACCTGGTAA ACGAAATCAA AGCGGGTATC GCGAAAGGTA AAAAACACGC GATCGTGGCG
ATTACCGAAC ATATGTGTGA TGTTGACGAA CTGGCGCATT TCATCGAGAA AGAAACCGGT
CGTGAAACCC GCGCAACTGT GCTGGGCCAC ATCCAGCGCG GTGGTTCTCC GGTGCCTTAC
GACCGTATTC TGGCTTCCCG TATGGGCGCT TACGCTATCG ATCTGCTGCT GGCAGGTTAC
GGCGGTCGTT GCGTAGGTAT CCAGAACGAA CAGTTGGTTC ACCACGACAT CATCGACGCT
ATCGAAAACA TGAAGCGTCC GTTCAAAGGC GACTGGCTGG ACTGCGCGAA AAAACTGTAT
TAA
|
|---|
| Protein sequence | MIKKIGVLTS GGDAPGMNAA IRGVVRSALT EGLEVMGIYD GYLGLYEDRM VQLDRYSVSD
MINRGGTFLG SARFPEFRDE NIRAVAIENL KKRGIDALVV IGGDGSYMGA MRLTEMGFPC
IGLPGTIDND IKGTDYTIGF FTALSTVVEA IDRLRDTSSS HQRISVVEVM GRYCGDLTLA
AAIAGGCEFV VVPEVEFSRE DLVNEIKAGI AKGKKHAIVA ITEHMCDVDE LAHFIEKETG
RETRATVLGH IQRGGSPVPY DRILASRMGA YAIDLLLAGY GGRCVGIQNE QLVHHDIIDA
IENMKRPFKG DWLDCAKKLY
|
|---|
| |