Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A4068 |
Symbol | fadA |
ID | 5595360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 4057869 |
End bp | 4059032 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640923171 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_001460637 |
Protein GI | 157163319 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.142998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGG TTGTCATTGT CGATGCAATT CGCACCCCGA TGGGCCGTTC GAAGGGCGGT GCTTTTCGTA ACGTGCGTGC AGAAGATCTC TCCGCTCATT TAATGCGTAG CCTGCTGGCG CGTAACCCGG CGCTGGAAGC GGCGGCCCTC GACGATATTT ACTGGGGTTG TGTGCAGCAG ACGCTGGAGC AGGGTTTTAA CATCGCCCGT AACGCGGCGC TGCTGGCAGA AGTACCACAC TCTGTCCCGG CGGTTACCGT CAATCGCTTG TGTGGTTCAT CCATGCAGGC ACTGCATGAC GCAGCACGGA TGATTATGAC CGGCGATGCG CAGGCATGTC TGGTTGGCGG CGTGGAGCAT ATGGGCCATG TGCCGATGAG TCACGGCGTC GATTTTCACC CCGGCCTGAG CCGCAATGTC GCCAAAGCGG CGGGCATGAT GGGCTTAACA GCAGAAATGC TGGCGCGTAT GCACGGTATC AGCCGTGAAA TGCAGGATGC CTTTGCCGCG CGATCGCACG CTCGTGCCTG GGCCGCCACG CAGTCGGCCG CATTTAAAAA TGAAATCATC CCGACCGGTG GTCACGATGC CGACGGCGTC CTGAAGCAGT TTAATTACGA CGAAGTGATT CGCCCGGAAA CCACCGTGGA AGCCCTCGCC ACGCTGCGTC CGGCGTTTGA TCCAGTAAAC GGTACGGTAA CGGCGGGCAC ATCTTCTGCA CTTTCCGATG GCGCAGCTGC CATGCTGGTG ATGAGTGAAA GCCGCGCCCA TGAATTAGGT CTTAAGCCGC GCGCTCGTGT GCGTTCGATG GCGGTCGTTG GTTGTGACCC ATCGATTATG GGTTACGGCC CGGTTCCGGC CTCAAAGCTG GCGCTGAAAA AAGCGGGGCT TTCTGCCAGC GATATCGGCG TGTTTGAGAT GAACGAAGCC TTTGCCGCGC AGATCCTGCC GTGCATTAAA GATCTCGGGC TAATGGAGCA GATTGACGAG AAGATCAACC TCAATGGTGG CGCGATCGCG CTGGGTCATC CGCTGGGTTG TTCCGGTGCG CGTATCAGCA CCACGCTGCT GAATCTGATG GAGCGCAAAG ACGTTCAGTT TGGTCTGGCG ACGATGTGTA TCGGTCTGGG TCAGGGTATT GCGACGGTGT TTGAGCGGGT TTAA
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Protein sequence | MEQVVIVDAI RTPMGRSKGG AFRNVRAEDL SAHLMRSLLA RNPALEAAAL DDIYWGCVQQ TLEQGFNIAR NAALLAEVPH SVPAVTVNRL CGSSMQALHD AARMIMTGDA QACLVGGVEH MGHVPMSHGV DFHPGLSRNV AKAAGMMGLT AEMLARMHGI SREMQDAFAA RSHARAWAAT QSAAFKNEII PTGGHDADGV LKQFNYDEVI RPETTVEALA TLRPAFDPVN GTVTAGTSSA LSDGAAAMLV MSESRAHELG LKPRARVRSM AVVGCDPSIM GYGPVPASKL ALKKAGLSAS DIGVFEMNEA FAAQILPCIK DLGLMEQIDE KINLNGGAIA LGHPLGCSGA RISTTLLNLM ERKDVQFGLA TMCIGLGQGI ATVFERV
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