Gene EcHS_A4047 details

Gene Information

• Locus tag: EcHS_A4047
• Symbol: rhtC
• ID: 5593228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 4038240
• End bp: 4038854
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640923151
• Product: threonine efflux system
• Protein accession: YP_001460617
• Protein GI: 157163299
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 70
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTATTTC TCACCGTCGC CATGGTGCAT ATTGTGGCGC TTATGAGCCC CGGTCCCGAT 
TTCTTTTTTG TCTCTCAGAC CGCTGTTAGT CGTTCCCGTA AAGAAGCGAT GATGGGCGTG 
CTGGGCATTA CCTGCGGTGT AATGGTTTGG GCTGGGATTG CGTTGCTTGG CCTGCATTTG 
ATTATCGAAA AAATGGCCTG GCTGCATACG CTGATTATGG TTGGCGGTGG CCTGTATCTC 
TGCTGGATGG GTTACCAGAT GCTACGCGGT GCACTGAAAA AAGAGGCTGT ATCTGCGCCT 
GCACCACAGA TTGAGCTGGC GAAAAGCGGG CGCAGTTTTC TGAAAGGTTT ACTGACCAAT 
CTCGCTAATC CGAAAGCGAT TATCTACTTT GGCTCGGTGT TCTCATTGTT TGTCGGTGAT 
AACGTTGGCA CTACCGCGCG CTGGGGCATT TTTGCGCTGA TCATTGTCGA AACACTGGCG 
TGGTTTACCG TCGTTGCCAG CCTGTTTGCC CTGCCGCAAA TGCGCCGTGG TTATCAACGT 
CTGGCGAAGT GGATTGATGG TTTTGCCGGG GCGTTATTTG CCGGATTTGG CATTCATTTG 
ATTATTTCGC GGTGA 

 

Protein sequence

MLFLTVAMVH IVALMSPGPD FFFVSQTAVS RSRKEAMMGV LGITCGVMVW AGIALLGLHL 
IIEKMAWLHT LIMVGGGLYL CWMGYQMLRG ALKKEAVSAP APQIELAKSG RSFLKGLLTN 
LANPKAIIYF GSVFSLFVGD NVGTTARWGI FALIIVETLA WFTVVASLFA LPQMRRGYQR 
LAKWIDGFAG ALFAGFGIHL IISR