| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4006 |
|---|
| Symbol | rfbA1 |
|---|
| ID | 5592288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 4002021 |
|---|
| End bp | 4002902 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640923110 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_001460581 |
|---|
| Protein GI | 157163263 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTA TTATCCTGGC GGGCGGTTCC GGCACCCGAT TGCATCCGAT TACGCGCGGC
GTATCGAAGC AACTGTTGCC GATTTACGAT AAGCCAATGA TTTACTATCC GCTGTCGGTG
CTGATGCTGG CCGGTATCCG CGAAATTCTC ATCATCACTA CGCCGGAAGA TAAAGGTTAT
TTCCAGCGCC TGCTGGGCGA TGGTAGTGAG TTCGGTATCC AGCTGGAATA TGCCGAACAG
CCCAGCCCGG ACGGTCTGGC GCAGGCCTTT ATCATCGGTG AAACCTTCCT TAATGGTGAA
CCTTCTTGTC TGGTGCTGGG CGATAACATC TTCTTCGGTC AGGGCTTCAG TCCGAAGCTG
CGTCATGTTG CGGCGCGCAC GGAAGGGGCG ACGGTTTTTG GCTATCAGGT GATGGACCCG
GAACGCTTTG GCGTGGTGGA ATTTGACGAC AATTTCCGCG CTATCTCGCT GGAAGAAAAG
CCAAAACAGC CGAAGTCAAA CTGGGCGGTG ACCGGGCTTT ATTTCTACGA CAGTAAAGTC
GTGGAGTACG CAAAGCAGGT GAAGCCGTCG GAGCGCGGTG AACTGGAGAT TACCTCCATC
AACCAGATGT ACCTCGAGGC GGGCAACCTG ACCGTTGAAC TGCTCGGGCG CGGATTTGCC
TGGCTGGATA CCGGCACTCA CGACAGCCTG ATTGAGGCCA GCACTTTTGT GCAGACAGTA
GAAAAACGCC AGGGCTTTAA GATTGCCTGC CTGGAAGAGA TCGCCTGGCG TAACGGCTGG
CTCGATGACG AGGGTGTGAA GCGTGCTGCC AGTTCATTAG CGAAAACTGG CTACGGCCAA
TATCTGCTGG AGTTACTTCG TGCCCGTCCG CGCCAGTATT GA
|
|---|
| Protein sequence | MKGIILAGGS GTRLHPITRG VSKQLLPIYD KPMIYYPLSV LMLAGIREIL IITTPEDKGY
FQRLLGDGSE FGIQLEYAEQ PSPDGLAQAF IIGETFLNGE PSCLVLGDNI FFGQGFSPKL
RHVAARTEGA TVFGYQVMDP ERFGVVEFDD NFRAISLEEK PKQPKSNWAV TGLYFYDSKV
VEYAKQVKPS ERGELEITSI NQMYLEAGNL TVELLGRGFA WLDTGTHDSL IEASTFVQTV
EKRQGFKIAC LEEIAWRNGW LDDEGVKRAA SSLAKTGYGQ YLLELLRARP RQY
|
|---|
| |