Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3948 |
Symbol | atpD |
ID | 5591041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3943172 |
End bp | 3944554 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640923055 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001460532 |
Protein GI | 157163214 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.440283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACTG GAAAGATTGT CCAGGTAATC GGCGCCGTAG TTGACGTCGA ATTCCCTCAG GATGCCGTAC CGCGCGTGTA CGATGCTCTT GAGGTGCAAA ATGGTAGTGA GCGTCTGGTG CTGGAAGTTC AGCAGCAGCT CGGCGGCGGT ATCGTACGTA CCATCGCAAT GGGTTCCTCC GACGGTCTGC GTCGCGGTCT GGATGTAAAA GACCTCGAAC ACCCGATTGA AGTCCCGGTA GGTAAAGCGA CTCTGGGCCG TATCATGAAC GTACTGGGTG AACCGGTCGA CATGAAAGGC GAGATCGGTG AAGAAGAGCG TTGGGCGATT CACCGCGCAG CACCTTCCTA CGAAGAGCTG TCAAACTCTC AGGAACTGCT GGAAACCGGT ATCAAAGTTA TCGACCTGAT GTGTCCGTTC GCTAAGGGCG GTAAAGTTGG TCTGTTCGGT GGTGCGGGTG TAGGTAAAAC CGTAAACATG ATGGAGCTCA TTCGTAACAT CGCGATCGAG CACTCCGGTT ACTCTGTGTT TGCGGGCGTA GGTGAACGTA CTCGTGAGGG TAACGACTTC TACCACGAAA TGACCGACTC CAACGTTATC GACAAAGTAT CCCTGGTGTA TGGCCAGATG AACGAGCCGC CGGGAAACCG TCTGCGCGTT GCTCTGACCG GTCTGACCAT GGCTGAGAAA TTCCGTGACG AAGGTCGTGA CGTTCTGCTG TTCGTTGACA ACATCTATCG TTACACCCTG GCCGGTACGG AAGTATCCGC ACTGCTGGGC CGTATGCCTT CAGCGGTAGG TTATCAGCCG ACCCTGGCGG AAGAGATGGG CGTTCTGCAG GAACGTATCA CCTCCACCAA AACTGGTTCT ATCACCTCCG TACAGGCAGT ATACGTACCT GCGGATGACT TGACTGACCC GTCTCCGGCA ACCACCTTTG CGCACCTTGA CGCAACCGTG GTACTGAGCC GTCAGATCGC GTCTCTGGGT ATCTACCCGG CCGTTGACCC GCTGGACTCC ACCAGCCGTC AGCTGGACCC GCTGGTGGTT GGTCAGGAAC ACTACGACAC CGCGCGTGGC GTTCAGTCCA TCCTGCAACG TTATCAGGAA CTGAAAGACA TCATCGCCAT CCTGGGTATG GATGAACTGT CTGAAGAAGA CAAACTGGTG GTAGCGCGTG CTCGTAAGAT CCAGCGCTTC CTGTCCCAGC CGTTCTTCGT GGCAGAAGTA TTCACCGGTT CTCCGGGTAA ATACGTCTCC CTGAAAGACA CCATCCGTGG CTTTAAAGGC ATCATGGAAG GCGAATACGA TCACCTGCCG GAGCAGGCGT TCTACATGGT CGGTTCCATC GAAGAAGCTG TGGAAAAAGC CAAAAAACTT TAA
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Protein sequence | MATGKIVQVI GAVVDVEFPQ DAVPRVYDAL EVQNGSERLV LEVQQQLGGG IVRTIAMGSS DGLRRGLDVK DLEHPIEVPV GKATLGRIMN VLGEPVDMKG EIGEEERWAI HRAAPSYEEL SNSQELLETG IKVIDLMCPF AKGGKVGLFG GAGVGKTVNM MELIRNIAIE HSGYSVFAGV GERTREGNDF YHEMTDSNVI DKVSLVYGQM NEPPGNRLRV ALTGLTMAEK FRDEGRDVLL FVDNIYRYTL AGTEVSALLG RMPSAVGYQP TLAEEMGVLQ ERITSTKTGS ITSVQAVYVP ADDLTDPSPA TTFAHLDATV VLSRQIASLG IYPAVDPLDS TSRQLDPLVV GQEHYDTARG VQSILQRYQE LKDIIAILGM DELSEEDKLV VARARKIQRF LSQPFFVAEV FTGSPGKYVS LKDTIRGFKG IMEGEYDHLP EQAFYMVGSI EEAVEKAKKL
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