| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3827 |
|---|
| Symbol | |
|---|
| ID | 5593374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3821824 |
|---|
| End bp | 3822858 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640922939 |
|---|
| Product | putative glycosyl transferase |
|---|
| Protein accession | YP_001460417 |
|---|
| Protein GI | 157163099 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.0526095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACA GCACCAATAA ACTTAGTGTT ATTATTCCGT TATATAATGC GGGCGATGAT
TTCCGCACTT GTATGGAATC TTTAATTACG CAAACCTGGA CTGCTCTGGA AATCATTATT
ATTAACGATG GTTCAACGGA TAATTCTGTT GAAATAGCAA AGTATTACGC AGAAAACAAT
CCGCACGTTC GTTTGTTGCA TCAGGCGAAT GCTGGCGCAT CGGTGGCGCG TAATCGTGGG
ATTGAAGTGG CAACGGGCAA ATATGTCGCT TTTGTCGATG CTGACGATGA AGTCTATCCC
ACCATGTACG AAACGCTGAT GACCATGGCG TTAGAGGACG ACCTCGACGT GGCGCAGTGC
AACGCTGACT GGTGTTTTCG TGAAACGGGA GAAACCTGGC AATCCATCCC CACCGATCGC
CTTCGCTCAA CCGGCGTCTT AACCGGCCCG GACTGGCTGC GGATGGGGCT TTCTTCGCGC
CGTTGGACTC ACGTTGTCTG GATGGGGGTT TATCGCCGTG ATGTTATTGT TAAAAATAAC
ATTAAATTTA TTGCCGGATT ACATCATCAG GATATTGTCT GGACAACAGA ATTCATGTTT
AACGCGCTGC GTGCGCGATA TACCGAGCAA TCATTATATA AATATTATCT GCATAATACG
TCAGTGAGTC GGTTGCATAG ACAAGGGAAT AAAAACCTTA ATTATCAACG TCACTATATT
AAGATTACCC GCCTGCTGGA GAAATTAAAT CGAAATTATG CCGACAAAAT TATGATTTAT
CCGGAATTTC ATCAGCAAAT AACTTACGAG GCATTGCGTG TTTGCCATGC GGTGCGCAAA
GAGCCGGATA TTCTTACCCG CCAACGGATG ATTGCCGAGA TATTTACTTC CGGTATGTAT
AAGCGCCTGA TTACCAATGT GCGCAGCGTG AAGGTCGGTT ACCAGGCGTT ACTGTGGTCT
TTCCGCTTAT GGCAATGGCG CGACAAAACG CGGTCGCACC ATCGCATTAC GCGTAGCGCC
TTTAATTTGC GCTAG
|
|---|
| Protein sequence | MMNSTNKLSV IIPLYNAGDD FRTCMESLIT QTWTALEIII INDGSTDNSV EIAKYYAENN
PHVRLLHQAN AGASVARNRG IEVATGKYVA FVDADDEVYP TMYETLMTMA LEDDLDVAQC
NADWCFRETG ETWQSIPTDR LRSTGVLTGP DWLRMGLSSR RWTHVVWMGV YRRDVIVKNN
IKFIAGLHHQ DIVWTTEFMF NALRARYTEQ SLYKYYLHNT SVSRLHRQGN KNLNYQRHYI
KITRLLEKLN RNYADKIMIY PEFHQQITYE ALRVCHAVRK EPDILTRQRM IAEIFTSGMY
KRLITNVRSV KVGYQALLWS FRLWQWRDKT RSHHRITRSA FNLR
|
|---|
| |