Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3788 |
Symbol | |
ID | 5593445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 3780431 |
End bp | 3781171 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640922902 |
Product | MltA-interacting protein MipA |
Protein accession | YP_001460380 |
Protein GI | 157163062 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATTA ATCGCAATAT TGTGGCGTTA TTTGCGTTGC CTTTTATGGC AAGCGCAACT GCTTCTGAAT TATCCATTGG TGCTGGTGCG GCTTATAATG AATCGCCTTA TCGCGGTTAT AATGAAAATA CGAAGGCAAT TCCGCTGATT AGTTATGAAG GTGATACTTT TTATGTTCGT CAGACCACGT TAGGTTTTAT TCTGTCGCAA AGTGAAAAAA ATGAACTTAG CCTGACCGCA TCCTGGATGC CGCTGGAATT TGACCCTACC GATAATGACG ATTATGCCAT GCAACAGCTT GATAAGCGTG ATAGTACGGC TATGGCGGGG GTTGCCTGGT ATCACCACGA GCGTTGGGGA ACCGTGAAAG CCTCTGCAGC TGCGGACGTT CTGGATAACA GCAACGGCTG GGTGGGGGAG CTATCGGTAT TCCACAAAAT GCAGATAGGT CGTCTGTCGC TGACACCTGC GCTGGGCGTT CTCTATTATG ACGAGAATTT CAGTGACTAT TACTATGGCA TTTCAGAGAG TGAGTCCCGT CGTAGCGGTC TGGCAAGTTA TTCCGCGCAG GATGCCTGGG TGCCCTATGT CAGCCTGACG GCAAAATACC CGATAGGAGA GCACGTCGTA TTGATGGCGA GCGCAGGATA CAGCGAGCTG CCGGAAGAGA TTACCGACAG CCCGATGATT GATCGTAATG AGAGTTTTAC CTTTGTCACC GGGGTGAGCT GGCGTTTTTA A
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Protein sequence | MLINRNIVAL FALPFMASAT ASELSIGAGA AYNESPYRGY NENTKAIPLI SYEGDTFYVR QTTLGFILSQ SEKNELSLTA SWMPLEFDPT DNDDYAMQQL DKRDSTAMAG VAWYHHERWG TVKASAAADV LDNSNGWVGE LSVFHKMQIG RLSLTPALGV LYYDENFSDY YYGISESESR RSGLASYSAQ DAWVPYVSLT AKYPIGEHVV LMASAGYSEL PEEITDSPMI DRNESFTFVT GVSWRF
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