Gene EcHS_A3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3780 
Symbol 
ID5592988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3773085 
End bp3773513 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID640922894 
Producthypothetical protein 
Protein accessionYP_001460372 
Protein GI157163054 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGCCG CCATTGAAAA GGCGCTCGAT TTTCTGCGCG CTACCGATTT CAACGCCCTG 
GAGCCGGGCG TTGTCGAAAT CGACGGCAAA AATATTTATG CGCAAATTAT CGATTTAACC
ACACGCGAAG CGGTGGAAAA CCGTCCGGAA GTGCATCGTC GGTATATCGA TATTCAGTTT
CTGGCGTGGG GTGAAGAGAA AATCGGCATT GCTATTGATA CGGGAAATAA TAAAGTCAGC
GAATCACTAT TAGAGCAGCG CGATATTATT TTTTATCATG ACAGTGAACA TGAATCATTT
ATAGAAATGA TACCGGGCAG CTACGCAATT TTCTTTCCGC AGGATGTTCA CCGACCAGGT
TGTATTTTGC AAACAGCCTC TGAGATACGA AAAATTGTGG TTAAAGTCGC ATTAACGGCG
CTGAATTAA
 
Protein sequence
MPAAIEKALD FLRATDFNAL EPGVVEIDGK NIYAQIIDLT TREAVENRPE VHRRYIDIQF 
LAWGEEKIGI AIDTGNNKVS ESLLEQRDII FYHDSEHESF IEMIPGSYAI FFPQDVHRPG
CILQTASEIR KIVVKVALTA LN