Gene EcHS_A3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3699 
SymbolyhiR 
ID5595306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3687896 
End bp3688738 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID640922813 
ProductDNA utilization protein YhiR 
Protein accessionYP_001460293 
Protein GI157162975 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTT ATCGCCACAG CTTTCACGCT GGCAACCACG CCGACGTCCT TAAACATACC 
GTTCAGAGCC TGATCATCGA GTCGCTGAAA GAGAAAGATA AACCGTTTCT CTATCTCGAC
ACCCACGCAG GGGCCGGGCG TTATCAGTTA GGCAGCGAAC ATGCCGAGCG TACCGGCGAA
TATCTCGAAG GCATCGCCCG TATCTGGCAG CAGGACGATT TGCCCGCAGA ACTGGAGGCG
TACATCAATG TGGTAAAACA CTTCAACCGT AGCGGTCAGT TGCGTTACTA CCCCGGTTCG
CCGTTGATTG CTCGCCTGCT ACTGCGTGAA CAGGACAGCC TGCAACTGAC CGAACTGCAC
CCGAGCGATT ACCCGTTGTT GCGTTCTGAA TTTCAGAAAG ATAGCCGTGC GCGTGTCGAA
AAAGCCGACG GTTTCCAGCA GCTTAAGGCC AAACTGCCGC CGGTTTCCCG CCGTGGTTTA
ATCCTTATCG ACCCGCCGTA TGAAATGAAA ACTGACTATC AAGCGGTGGT CAGCGGGATA
GCAGAAGGTT ACAAACGTTT CGCCACTGGT ATTTACGCAC TGTGGTATCC GGTGGTGCTG
CGTCAGCAAA TTAAGCGCAT GATCCACGAT CTGGAAGCGA CCGGTATTCG CAAAATTCTG
CAAATTGAAC TGGCGGTACT GCCAGACAGC GATCGCCGTG GCATGACCGC TTCCGGCATG
ATTGTGATTA ACCCGCCGTG GAAACTGGAA CAACAGATGA ATAACGTGCT GCCGTGGCTG
CACAGCAAAC TGGTTCCGGC AGGCACCGGG CACGCCACCG TAAGCTGGAT CGTGCCGGAG
TAA
 
Protein sequence
MLSYRHSFHA GNHADVLKHT VQSLIIESLK EKDKPFLYLD THAGAGRYQL GSEHAERTGE 
YLEGIARIWQ QDDLPAELEA YINVVKHFNR SGQLRYYPGS PLIARLLLRE QDSLQLTELH
PSDYPLLRSE FQKDSRARVE KADGFQQLKA KLPPVSRRGL ILIDPPYEMK TDYQAVVSGI
AEGYKRFATG IYALWYPVVL RQQIKRMIHD LEATGIRKIL QIELAVLPDS DRRGMTASGM
IVINPPWKLE QQMNNVLPWL HSKLVPAGTG HATVSWIVPE