Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3613 |
Symbol | gntT |
ID | 5594934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3590900 |
End bp | 3592216 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640922730 |
Product | high-affinity gluconate transporter |
Protein accession | YP_001460211 |
Protein GI | 157162893 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTAG TCATTGTTGC TATCGGTGTA ATCTTGTTGT TGCTCCTGAT GATCCGCTTC AAAATGAACG GCTTCATCGC TCTCGTCCTC GTGGCGCTTG CTGTTGGATT AATGCAAGGA ATGCCGCTGG ATAAAGTTAT TGGCTCCATC AAAGCCGGTG TCGGCGGGAC GCTCGGTAGC CTTGCCCTGA TCATGGGTTT TGGCGCAATG CTGGGCAAAA TGCTGGCAGA CTGCGGTGGC GCACAACGTA TCGCCACCAC GCTGATTGCC AAATTTGGTA AAAAACACAT CCAGTGGGCG GTGGTACTGA CCGGTTTTAC CGTTGGTTTT GCCCTGTTCT ATGAAGTGGG CTTTGTGCTG ATGCTGCCGC TGGTGTTTAC CATCGCGGCT TCTGCGAATA TTCCACTGCT GTATGTTGGT GTACCAATGG CAGCTGCACT GTCTGTGACC CACGGCTTCC TGCCACCGCA TCCGGGTCCG ACTGCGATTG CCACCATTTT CAATGCCGAT ATGGGTAAAA CCCTGCTGTA CGGTACTATT CTGGCAATCC CGACCGTGAT TCTCGCCGGT CCGGTTTACG CTCGCGTGTT GAAAGGTATC GATAAGCCAA TTCCGGAAGG TCTGTACAGC GCGAAAACCT TCAGCGAAGA AGAGATGCCG AGCTTTGGCG TCAGCGTCTG GACCTCTCTG GTGCCGGTAG TACTGATGGC GATGCGTGCG ATTGCCGAAA TGATCCTGCC GAAAGGTCAC GCTTTCCTGC CGGTAGCGGA GTTCCTCGGT GACCCGGTAA TGGCAACGCT GATTGCCGTG CTGATTGCGA TGTTCACCTT TGGTCTAAAC CGTGGTCGTT CAATGGATCA GATTAACGAC ACGCTGGTTT CTTCCATCAA AATCATTGCG ATGATGCTGT TGATCATCGG TGGTGGCGGT GCGTTCAAGC AGGTGCTGGT AGACAGCGGC GTGGACAAAT ACATTGCTTC CATGATGCAC GAAACCAACA TTTCTCCGCT GCTGATGGCC TGGTCGATTG CTGCCGTACT GCGTATCGCG CTGGGTTCCG CAACCGTTGC GGCAATCACT GCGGGTGGTA TCGCGGCACC GCTGATTGCA ACGACGGGTG TTAGCCCGGA GCTGATGGTT ATTGCGGTTG GTTCCGGTAG TGTGATTTTC TCTCATGTGA ACGATCCGGG CTTCTGGCTG TTCAAAGAGT ACTTTAACCT GACTATCGGC GAGACCATCA AATCCTGGTC GATGCTGGAA ACCATTATCT CGGTGTGCGG TCTGGTAGGC TGTCTGCTGC TGAATATGGT GATTTGA
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Protein sequence | MPLVIVAIGV ILLLLLMIRF KMNGFIALVL VALAVGLMQG MPLDKVIGSI KAGVGGTLGS LALIMGFGAM LGKMLADCGG AQRIATTLIA KFGKKHIQWA VVLTGFTVGF ALFYEVGFVL MLPLVFTIAA SANIPLLYVG VPMAAALSVT HGFLPPHPGP TAIATIFNAD MGKTLLYGTI LAIPTVILAG PVYARVLKGI DKPIPEGLYS AKTFSEEEMP SFGVSVWTSL VPVVLMAMRA IAEMILPKGH AFLPVAEFLG DPVMATLIAV LIAMFTFGLN RGRSMDQIND TLVSSIKIIA MMLLIIGGGG AFKQVLVDSG VDKYIASMMH ETNISPLLMA WSIAAVLRIA LGSATVAAIT AGGIAAPLIA TTGVSPELMV IAVGSGSVIF SHVNDPGFWL FKEYFNLTIG ETIKSWSMLE TIISVCGLVG CLLLNMVI
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