Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3561 |
Symbol | nirB |
ID | 5595272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3538355 |
End bp | 3540898 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640922678 |
Product | nitrite reductase [NAD(P)H], large subunit |
Protein accession | YP_001460159 |
Protein GI | 157162841 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAAG TCAGACTCGC AATTATCGGT AACGGTATGG TCGGCCATCG CTTTATCGAA GATCTTCTTG ATAAATCTGA TGCGGCCAAC TTTGATATTA CCGTTTTCTG TGAAGAACCG CGCATCGCTT ATGACCGCGT ACACCTCTCG TCTTACTTCT CTCACCACAC CGCCGAAGAG CTGTCGCTGG TGCGCGAAGG CTTCTACGAG AAACACGGCA TCAAAGTTCT GGTCGGCGAA CGCGCTATCA CCATCAACCG TCAGGAGAAG GTGATTCACT CCAGCGCCGG GCGCACCGTT TTTTATGACA AGCTGATCAT GGCGACCGGT TCCTACCCGT GGATCCCGCC AATCAAAGGT TCTGATACTC AGGACTGCTT TGTCTATCGC ACTATTGAAG ACCTCAACGC CATTGAATCC TGCGCCCGTC GCAGCAAACG CGGTGCCGTT GTTGGTGGCG GCCTGTTAGG TCTGGAAGCC GCTGGCGCGC TGAAAAACTT AGGTATTGAA ACCCACGTTA TCGAATTTGC CCCTATGCTG ATGGCGGAAC AGCTTGATCA GATGGGTGGC GAGCAGCTGC GTCGCAAAAT CGAAAGTATG GGCGTGCGCG TTCACACCAG CAAAAACACC CTTGAGATTG TGCAGGAAGG TGTCGAAGCG CGTAAAACCA TGCGTTTTGC CGACGGCAGC GAATTGGAAG TCGACTTTAT CGTCTTCTCT ACCGGTATCC GTCCGCGCGA TAAGCTGGCA ACCCAGTGTG GTCTGGACGT TGCTCCGCGT GGGGGTATTG TCATTAATGA TTCCTGCCAG ACTTCCGATC CGGATATCTA CGCCATCGGT GAATGCGCAA GCTGGAACAA CCGTGTATTT GGTCTGGTAG CACCAGGCTA CAAAATGGCG CAGGTCGCCG TTGACCATAT TCTCAGTAGC GAAAACGCCT TTGAAGGTGC TGACCTTAGC GCCAAGCTGA AACTGCTGGG CGTAGACGTA GGCGGTATTG GTGATGCGCA CGGTCGCACG CCTGGCGCAC GTAGCTATGT TTACCTCGAC GAAAGCAAAG AGATCTACAA ACGCCTGATT GTCAGCGAAG ACAACAAAAC CCTGCTCGGT GCGGTACTGG TGGGCGATAC CAGCGACTAC GGCAACCTGC TGCAACTGGT GCTGAACGCT ATCGAGCTGC CGGAAAACCC GGATTCTCTG ATTCTGCCGG CGCACTCGGG TAGCGGTAAG CCGTCTATCG GTGTTGATAA ACTGCCGGAC AGCGCGCAAA TCTGCTCCTG CTTCGACGTC ACCAAAGGTG ATCTGATTGC TGCCATCAAC AAAGGCTGCC ACACCGTTGC GGCGCTGAAA GCCGAAACCA AAGCGGGTAC TGGCTGCGGT GGCTGTATCC CGCTGGTCAC TCAGGTACTG AACGCGGAAC TGGCGAAACA GGGCATCGAA GTTAACAACA ACCTGTGCGA ACACTTTGCT TATTCGCGTC AGGAACTGTT CCATTTGATC CGCGTTGAAG GCATTAAAAC CTTCGAAGAA CTGCTGGCGA AACACGGCAA AGGCTACGGT TGTGAAGTTT GTAAACCGAC CGTCGGTTCG CTGCTGGCCT CCTGCTGGAA CGAATACATT CTGAAGCCGG AACATACTCC GCTGCAGGAT TCTAACGACA ACTTCCTCGC TAACATCCAG AAAGACGGCA CCTACTCGGT GATCCCGCGC TCTCCGGGCG GTGAAATCAC CCCGGAAGGG CTGATGGCAG TGGGTCGTAT CGCGCGTGAA TTTAATCTCT ACACCAAAAT CACCGGTTCC CAGCGCCTGG CGATGTTTGG CGCACAGAAA GACGATCTGC CGGAGATCTG GCGTCAGCTG ATTGAAGCCG GCTTCGAAAC CGGTCATGCC TATGCGAAAG CACTGCGTAT GGCGAAAACC TGCGTGGGTA GCACCTGGTG CCGCTACGGC GTTGGCGACA GCGTCGGCCT CGGCGTGGAA CTGGAAAACC GCTACAAAGG CATCCGTACG CCGCACAAAA TGAAGTTCGG TGTCTCCGGC TGTACCCGTG AATGTTCAGA AGCTCAGGGT AAAGACGTGG GTATTATCGC CACTGAAAAA GGCTGGAACT TGTATGTTTG CGGTAACGGC GGCATGAAAC CGCGTCATGC GGATCTGCTG GCAGCGGATA TCGATCGCGA AACGCTGATC AAATATCTCG ACCGCTTCAT GATGTTCTAC ATCCGTACCG CCGACAAACT GACGCGTACC GCGCCGTGGT TAGAAAACCT CGAAGGCGGC ATCGATTATC TGAAAGCGGT GATCATTGAC GACAAACTGG GGCTGAACGC TCATCTGGAA GAAGAGATGG CGCGCCTGCG TGAAGCGGTA GTGTGTGAGT GGACTGAAAC GGTCAATACG CCGTCTGCGC AGACTCGCTT CAAACACTTC ATCAACAGCG ACAAGCGTGA CCCGAACGTG CAGATGGTGC CAGAGCGCGA ACAGCACCGT CCGGCAACGC CGTATGAACG TATCCCGGTA ACTCTGGTGG AGGACAACGC ATGA
|
Protein sequence | MSKVRLAIIG NGMVGHRFIE DLLDKSDAAN FDITVFCEEP RIAYDRVHLS SYFSHHTAEE LSLVREGFYE KHGIKVLVGE RAITINRQEK VIHSSAGRTV FYDKLIMATG SYPWIPPIKG SDTQDCFVYR TIEDLNAIES CARRSKRGAV VGGGLLGLEA AGALKNLGIE THVIEFAPML MAEQLDQMGG EQLRRKIESM GVRVHTSKNT LEIVQEGVEA RKTMRFADGS ELEVDFIVFS TGIRPRDKLA TQCGLDVAPR GGIVINDSCQ TSDPDIYAIG ECASWNNRVF GLVAPGYKMA QVAVDHILSS ENAFEGADLS AKLKLLGVDV GGIGDAHGRT PGARSYVYLD ESKEIYKRLI VSEDNKTLLG AVLVGDTSDY GNLLQLVLNA IELPENPDSL ILPAHSGSGK PSIGVDKLPD SAQICSCFDV TKGDLIAAIN KGCHTVAALK AETKAGTGCG GCIPLVTQVL NAELAKQGIE VNNNLCEHFA YSRQELFHLI RVEGIKTFEE LLAKHGKGYG CEVCKPTVGS LLASCWNEYI LKPEHTPLQD SNDNFLANIQ KDGTYSVIPR SPGGEITPEG LMAVGRIARE FNLYTKITGS QRLAMFGAQK DDLPEIWRQL IEAGFETGHA YAKALRMAKT CVGSTWCRYG VGDSVGLGVE LENRYKGIRT PHKMKFGVSG CTRECSEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL AADIDRETLI KYLDRFMMFY IRTADKLTRT APWLENLEGG IDYLKAVIID DKLGLNAHLE EEMARLREAV VCEWTETVNT PSAQTRFKHF INSDKRDPNV QMVPEREQHR PATPYERIPV TLVEDNA
|
| |