Gene EcHS_A3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3513 
SymbolrplD 
ID5592739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp3496024 
End bp3496629 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content53% 
IMG OID640922630 
Product50S ribosomal protein L4 
Protein accessionYP_001460111 
Protein GI157162793 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000000000109628 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAG TATTGAAAGA CGCGCAGAGC GCGCTGACTG TTTCCGAAAC TACCTTCGGT 
CGTGATTTCA ACGAAGCGCT GGTTCACCAG GTTGTTGTTG CTTATGCAGC TGGTGCTCGT 
CAGGGTACTC GTGCTCAGAA GACTCGTGCT GAAGTAACTG GTTCCGGTAA AAAACCGTGG 
CGCCAGAAAG GCACCGGCCG TGCGCGTTCT GGTTCTATCA AGAGCCCGAT CTGGCGTTCT 
GGTGGCGTGA CCTTTGCTGC TCGTCCGCAG GACCACAGTC AAAAAGTTAA CAAGAAGATG 
TACCGCGGCG CGCTGAAAAG CATCCTGTCC GAACTGGTAC GTCAGGATCG TCTGATCGTT 
GTCGAGAAGT TCTCTGTAGA AGCGCCGAAA ACTAAGCTGC TGGCACAGAA ACTGAAAGAC 
ATGGCTCTGG AAGATGTGCT GATCATCACC GGTGAGCTGG ACGAAAACCT GTTCCTGGCT 
GCGCGCAACC TGCACAAGGT TGACGTACGC GATGCAACTG GTATCGACCC GGTTAGCCTG 
ATCGCCTTCG ACAAAGTCGT AATGACTGCT GATGCTGTTA AGCAAGTTGA GGAGATGCTG 
GCATGA
 
Protein sequence
MELVLKDAQS ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARS GSIKSPIWRS GGVTFAARPQ DHSQKVNKKM YRGALKSILS ELVRQDRLIV 
VEKFSVEAPK TKLLAQKLKD MALEDVLIIT GELDENLFLA ARNLHKVDVR DATGIDPVSL 
IAFDKVVMTA DAVKQVEEML A