Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A3406 |
Symbol | gltD |
ID | 5593362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 3410125 |
End bp | 3411543 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640922527 |
Product | glutamate synthase subunit beta |
Protein accession | YP_001460015 |
Protein GI | 157162697 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGA ATGTTTATCA ATTTATCGAC CTGCAGCGCG TTGATCCGCC AAAGAAACCG CTGAAGATCC GCAAAATTGA GTTTGTTGAA ATTTACGAGC CGTTTTCCGA AGGCCAGGCC AAAGCGCAGG CTGACCGCTG CCTGTCGTGC GGCAACCCAT ACTGCGAGTG GAAATGCCCG GTACACAACT ACATCCCGAA CTGGCTGAAG CTCGCCAACG AGGGGCGTAT TTTTGAAGCG GCGGAACTGT CGCACCAGAC CAACACCCTG CCGGAAGTTT GCGGACGAGT CTGCCCGCAA GACCGTCTGT GCGAAGGTTC CTGCACTCTG AACGATGAGT TTGGCGCGGT GACCATCGGC AACATTGAGC GCTATATCAA CGATAAAGCG TTCGAGATGG GCTGGCGTCC GGATATGTCT GGTGTGAAAC AGACCGGTAA AAAAGTGGCG ATTATCGGCG CAGGCCCGGC AGGTCTGGCG TGTGCGGATG TCCTGACGCG TAACGGCGTA AAAGCCGTTG TCTTCGACCG TCATCCAGAA ATTGGCGGGC TGCTGACCTT CGGTATTCCG GCCTTCAAGC TGGAAAAAGA GGTAATGACG CGTCGCCGTG AAATCTTCAC CGGCATGGGT ATTGAATTCA AACTCAATAC CGAAGTGGGC CGCGACGTGC AGCTGGACGA TCTGCTGAGT GATTACGATG CCGTCTTCCT TGGCGTCGGG ACTTATCAGT CAATGCACGG CGGGCTGGAA AACGAAGACG CCGATGGCGT GTACGCAGCG CTGCCGTTCC TTATCGCCAA CACCAAACAG TTAATGGGCT TTGGTGAAAC CCGCGACGAA CCGTTCGTCA GCATGGAAGG CAAACGCGTG GTGGTCCTTG GCGGTGGCGA CACTGCGATG GACTGCGTGC GTACGTCCGT GCGCCAGGGA GCGAAGCACG TTACCTGTGC CTATCGTCGT GATGAAGAGA ACATGCCGGG TTCCCGCCGC GAAGTGAAAA ACGCGCGGGA AGAAGGCGTA GAGTTCAAAT TCAACGTCCA GCCACTGGGG ATTGAAGTGA ACGGTAACGG CAAAGTCAGC GGCGTAAAAA TGGTACGTAC CGAAATGGGC GAACCGGATG CCAAAGGCCG TCGCCGCGCG GAGATCGTTG CAGGTTCCGA ACATATCGTT CCGGCAGATG CGGTGATCAT GGCGTTTGGT TTCCGTCCAC ACAACATGGA ATGGCTGGCA AAACACAGCG TCGAGCTGGA TTCACAAGGC CGCATCATCG CCCCGGAAGG CAGCGACAAC GCCTTCCAGA CCAGCAACCC GAAAATCTTT GCTGGCGGCG ATATCGTCCG TGGTTCCGAT CTGGTGGTAA CCGCTATTGC CGAAGGTCGT AAGGCGGCAG ACGGTATTAT GAACTGGCTG GAAGTTTAA
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Protein sequence | MSQNVYQFID LQRVDPPKKP LKIRKIEFVE IYEPFSEGQA KAQADRCLSC GNPYCEWKCP VHNYIPNWLK LANEGRIFEA AELSHQTNTL PEVCGRVCPQ DRLCEGSCTL NDEFGAVTIG NIERYINDKA FEMGWRPDMS GVKQTGKKVA IIGAGPAGLA CADVLTRNGV KAVVFDRHPE IGGLLTFGIP AFKLEKEVMT RRREIFTGMG IEFKLNTEVG RDVQLDDLLS DYDAVFLGVG TYQSMHGGLE NEDADGVYAA LPFLIANTKQ LMGFGETRDE PFVSMEGKRV VVLGGGDTAM DCVRTSVRQG AKHVTCAYRR DEENMPGSRR EVKNAREEGV EFKFNVQPLG IEVNGNGKVS GVKMVRTEMG EPDAKGRRRA EIVAGSEHIV PADAVIMAFG FRPHNMEWLA KHSVELDSQG RIIAPEGSDN AFQTSNPKIF AGGDIVRGSD LVVTAIAEGR KAADGIMNWL EV
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