| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3335 |
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| Symbol | |
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| ID | 5594848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 3339015 |
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| End bp | 3339710 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640922453 |
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| Product | pili assembly chaperone protein |
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| Protein accession | YP_001459946 |
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| Protein GI | 157162628 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.63342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAC GAACATTCGC GGTGATATTA ACCTTGTTGT GTAGCTTCTG TATTGGCCAG
GCGCTTGCAG GAGGAATCGT TTTACAGCGA ACGCGAGTGA TCTATGATGC CAGCCGCAAA
GAGGCTGCGT TACCTGTCGC AAACAAAGGC GCAGAAACGC CTTATTTACT GCAATCATGG
GTAGATAATA TAGATGGTAA AAGCCGTGCC CCATTTATTA TAACCCCACC GCTATTTCGT
CTTGAGGCTG GCGATGACTC ATCACTGCGA ATTATTAAAA CAGCTGATAA CCTGCCTGAA
AATAAAGAGT CGCTGTTCTA CATTAATGTT CGTGCCATTC CAGCAAAGAA AAAATCAGAT
GATGTTAATG CTAACGAGTT GACGCTGGTA TTTAAAACAC GGATCAAAAT GTTTTATCGC
CCCGCACACC TGAAGGGACG GGTAAACGAT GCGTGGAAAT CACTGGAATT TAAACGTAGT
GATCATTCAC TCAATATATA TAACCCAACT GAATATTACG TCGTATTTGC CGGATTGGCA
GTCGATAAAA TCGATCTCAC AAGCAAAATT GAATATATCG CGCCCGGAGA ACATAAACAG
TTACCACTTC CTGCATCTGG CGGAAAGAAC GTGAAATGGG CTGCGATCAA TGATTATGGC
GGCAGTTCCG GGACAGAAAC TCGTCCACTG CAATAA
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| Protein sequence | MSKRTFAVIL TLLCSFCIGQ ALAGGIVLQR TRVIYDASRK EAALPVANKG AETPYLLQSW
VDNIDGKSRA PFIITPPLFR LEAGDDSSLR IIKTADNLPE NKESLFYINV RAIPAKKKSD
DVNANELTLV FKTRIKMFYR PAHLKGRVND AWKSLEFKRS DHSLNIYNPT EYYVVFAGLA
VDKIDLTSKI EYIAPGEHKQ LPLPASGGKN VKWAAINDYG GSSGTETRPL Q
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