Gene EcHS_A3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3321 
Symbol 
ID5592019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3326476 
End bp3327285 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content52% 
IMG OID640922439 
ProductDNA-binding transcriptional regulator AgaR 
Protein accessionYP_001459932 
Protein GI157162614 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA CCGACGCTTC AGGTGAGAAG CGAGTGACAG GCACCAGCGA GCGACGAGAA 
CAGATCATTC AGCGTCTGCG ACAGCAAGGG AGTGTGCAGG TTAACGATCT GTCGGCATTG
TATGGCGTAT CTACCGTGAC GATCCGCAAC GATCTGGCGT TTCTGGAAAA GCAGGGGATC
GCTGTGCGTG CCTATGGTGG CGCGTTGATC TGCGATAGCA CGACGCCGTC AGTCGAGCCA
TCAGTGGAAG ATAAAAGCGC ACTGAACACC GCGATGAAAC GCAGCGTTGC GAAAGCTGCC
GTTGAGTTGA TTCAGCCAGG TCATCGGGTG ATCCTCGATT CCGGGACCAC CACTTTTGAG
ATTGCTCGTC TGATGCGCAA GCACACTGAC GTAATTGCGA TGACCAACGG TATGAACGTG
GCTAATGCTT TGCTGGAAGC GGAAGGCGTT GAGCTGCTGA TGACCGGCGG GCATTTGCGC
CGTCAGTCGC AATCTTTTTA CGGCGATCAG GCTGAACAAT CGCTGCAAAA TTACCACTTC
GATATGCTGT TTCTTGGTGT AGATGCGATC GATCTGGAGC GCGGCGTCAG CACGCATAAT
GAAGATGAAG CCCGTTTAAA CCGCCGGATG TGCGAAGTTG CGGAACGGAT CATCGTAGTC
ACCGATTCCA GTAAGTTCAA TCGTTCCAGT TTACATAAGA TCATTGATAC TCAACGTATC
GACATGATCA TTGTTGATGA AGGCATTCCT GCGGATAGTC TGGAAGGACT GCGAAAGGCT
GGGGTTGAAG TGATTCTGGT CGGGGAGTGA
 
Protein sequence
MSNTDASGEK RVTGTSERRE QIIQRLRQQG SVQVNDLSAL YGVSTVTIRN DLAFLEKQGI 
AVRAYGGALI CDSTTPSVEP SVEDKSALNT AMKRSVAKAA VELIQPGHRV ILDSGTTTFE
IARLMRKHTD VIAMTNGMNV ANALLEAEGV ELLMTGGHLR RQSQSFYGDQ AEQSLQNYHF
DMLFLGVDAI DLERGVSTHN EDEARLNRRM CEVAERIIVV TDSSKFNRSS LHKIIDTQRI
DMIIVDEGIP ADSLEGLRKA GVEVILVGE