Gene EcHS_A3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3272 
SymbolsstT 
ID5595077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3283497 
End bp3284741 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content55% 
IMG OID640922390 
Productserine/threonine transporter SstT 
Protein accessionYP_001459884 
Protein GI157162566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACGC AACGTTCACC GGGGCTATTC CGGCGTCTGG CTCATGGCAG CCTGGTAAAA 
CAAATCCTGG TCGGCCTTGT TCTGGGGATT CTTCTGGCAT GGATCTCAAA ACCCGCGGCG
GAAGCTGTTG GTCTGTTAGG TACTTTGTTC GTCGGCGCAC TGAAAGCTGT TGCCCCCATC
CTGGTGTTGA TGCTGGTAAT GGCATCTATT GCTAACCACC AGCACGGTCA GAAAACCAAT
ATCCGCCCTA TTTTGTTCCT CTATCTACTG GGCACCTTCT CTGCTGCTCT GGCCGCAGTA
GTCTTCAGCT TTGCCTTCCC TTCTACCCTG CATTTATCCA GTAGCGCGGG TGATATTTCG
CCGCCGTCAG GCATTGTCGA AGTGATGCGC GGGCTGGTAA TGAGCATGGT TTCCAACCCC
ATCGACGCGC TGCTGAAAGG TAACTACATC GGGATTCTGG TGTGGGCGAT CGGCCTCGGC
TTCGCACTGC GTCACGGTAA CGAGACCACC AAAAACCTGG TCAACGATAT GTCGAATGCC
GTCACCTTTA TGGTGAAACT GGTCATTCGC TTCGCACCGA TTGGTATTTT TGGTCTGGTT
TCTTCTACCC TGGCAACCAC CGGTTTCTCC ACACTGTGGG GCTACGCGCA ACTGCTGTTC
GTGCTGGTTG GCTGCATGTT AATGGTGGCG CTGGTGGTTA ACCCATTGCT GGTGTGGTGG
AAAATTCGTC GTAACCCGTT CCCGCTGGTG CTGCTGTGCC TGCGCGAAAG CGGTGTGTAT
GCCTTCTTCA CCCGCAGCTC TGCAGCGAAC ATTCCGGTGA ATATGGCGCT GTGTGAAAAG
CTGAATCTGG ATCGCGATAC CTATTCCGTT TCTATTCCGC TGGGAGCCAC CATCAATATG
GCGGGCGCAG CAATCACTAT TACCGTGTTG ACGCTGGCTG CGGTTAATAC GCTGGGTATT
CCGGTCGATC TGCCCACGGC GCTGCTGTTG AGCGTGGTGG CTTCTCTGTG TGCCTGTGGC
GCATCCGGCG TGGCGGGGGG GTCTCTGCTG CTGATCCCAC TGGCCTGTAA TATGTTCGGT
ATTTCGAACG ATATCGCCAT GCAGGTGGTT GCCGTCGGCT TTATCATCGG CGTATTGCAG
GACTCTTGCG AAACCGCGCT GAACTCTTCA ACTGACGTGC TGTTCACTGC GGCAGCTTGC
CAGGCAGAAG ACGATCGTCT GGCAAATAGC GCCCTGCGTA ATTAA
 
Protein sequence
MTTQRSPGLF RRLAHGSLVK QILVGLVLGI LLAWISKPAA EAVGLLGTLF VGALKAVAPI 
LVLMLVMASI ANHQHGQKTN IRPILFLYLL GTFSAALAAV VFSFAFPSTL HLSSSAGDIS
PPSGIVEVMR GLVMSMVSNP IDALLKGNYI GILVWAIGLG FALRHGNETT KNLVNDMSNA
VTFMVKLVIR FAPIGIFGLV SSTLATTGFS TLWGYAQLLF VLVGCMLMVA LVVNPLLVWW
KIRRNPFPLV LLCLRESGVY AFFTRSSAAN IPVNMALCEK LNLDRDTYSV SIPLGATINM
AGAAITITVL TLAAVNTLGI PVDLPTALLL SVVASLCACG ASGVAGGSLL LIPLACNMFG
ISNDIAMQVV AVGFIIGVLQ DSCETALNSS TDVLFTAAAC QAEDDRLANS ALRN