Gene EcHS_A3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3182 
Symbol 
ID5593572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3194493 
End bp3195377 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content54% 
IMG OID640922301 
Productoxidoreductase 
Protein accessionYP_001459799 
Protein GI157162481 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATT TAAAAGACCC GACCACGCAG TATTACACTG GTGAATATCC CAAACAGAAA 
CAACCGACGC CAGGCATCCA GGCGAAGATG ACACCGGTAC CGGATTGCGG CGAGAAAACC
TATGTTGGTA GCGGTCGCCT GAAAGATCGT AAAGCACTGG TGACAGGGGG CGATTCCGGA
ATAGGTCGCG CTGCCGCCAT CGCTTACGCG CGTGAAGGGG CTGACGTGGC GATCAGTTAT
CTTCCCGTGG AAGAAGAAGA CGCTCAGGAT GTGAAAAAGA TCATTGAAGA ATGCGGACGC
AAAGCCGTTC TGCTGCCAGG CGATTTAAGC GATGAGAAAT TTGCCCGTTC GCTGGTTCAC
GAAGCGCACA AGGCGTTAGG CGGGCTGGAT ATTATGGCGC TGGTCGCCGG GAAACAGGTT
GCCATTCCGG ATATTGCAGA CCTCACCAGC GAACAGTTTC AAAAGACCTT TGCCATTAAC
GTTTTCGCGC TGTTCTGGCT AACCCAGGAA GCGATCCCCC TGCTACCGAA AGGTGCAAGT
ATCATCACCA CTTCGTCAAT CCAGGCATAC CAGCCAAGTC CGCATTTACT GGACTATGCG
GCTACGAAGG CGGCGATTCT GAACTACAGC CGTGGCTTGG CAAAACAGGT CGCGGAGAAA
GGTATTCGGG TGAATATTGT CGCGCCAGGC CCGATCTGGA CAGCACTGCA AATTTCCGGC
GGACAAACGC AGGATAAGAT CCCGCAGTTT GGTCAGCAAA CGCCGATGAA ACGTGCGGGG
CAACCGGCGG AACTGGCCCC TGTATATGTT TATCTGGCAA GTCAGGAGTC GAGCTACGTC
ACCGCAGAAG TGCACGGCGT GTGCGGCGGC GAGCATTTAG GTTAA
 
Protein sequence
MSHLKDPTTQ YYTGEYPKQK QPTPGIQAKM TPVPDCGEKT YVGSGRLKDR KALVTGGDSG 
IGRAAAIAYA REGADVAISY LPVEEEDAQD VKKIIEECGR KAVLLPGDLS DEKFARSLVH
EAHKALGGLD IMALVAGKQV AIPDIADLTS EQFQKTFAIN VFALFWLTQE AIPLLPKGAS
IITTSSIQAY QPSPHLLDYA ATKAAILNYS RGLAKQVAEK GIRVNIVAPG PIWTALQISG
GQTQDKIPQF GQQTPMKRAG QPAELAPVYV YLASQESSYV TAEVHGVCGG EHLG