| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3136 |
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| Symbol | gspF2 |
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| ID | 5595255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3144205 |
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| End bp | 3145428 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640922255 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001459754 |
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| Protein GI | 157162436 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 83 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTGT TTTACTATCA GGCGCTGGAG CGTAATGGTC GCAAAACCAA AGGTATGATT
GAGGCGGATT CCGCGCGTCA TGCCCGCCAG TTGTTGCGCG GTAAAGAGCT TATCCCCGTG
CATATTGAAG CCCGGATGAA TACTTCGTCA GGGGGGATGT TGCAGCGTCG GCGGCACGCA
CATCGTCGCG TGGCGGCGGC AGATCTTGCG CTGTTCACGC GCCAACTGGC AACGCTGGTA
CAGGCAGCAA TGCCGCTGGA AACCTGCTTA CAGGCGGTCA GTGAGCAAAG TGAAAAACTG
CATGTAAAAA GCCTCGGAAT GGCGCTGCGC AGCCGGATTC AGGAAGGTTA CACCCTGTCG
GACAGCCTGC GCGAACATCC CCGCGTCTTT GATTCTCTGT TTTGTTCGAT GGTTGCTGCC
GGAGAAAAAT CCGGGCATCT CGACGTGGTG CTCAATCGCC TGGCAGATTA CACCGAACAG
CGACAGCGCC TGAAATCACG TCTATTGCAG GCCATGCTCT ATCCGCTGGT TCTGCTGGTG
GTGGCAACGG GCGTAGTCAC TATTTTGCTG ACGGCAGTGG TGCCGAAAAT CATCGAACAG
TTCGATCACC TCGGACACGC GCTGCCCGCC ACCACCCGCG CGCTTATCGC CATGAGCGAC
GCGTTACAGG CCAGCGGCGT TTACTGGCTG GCGGGATTGC TGGCGCTTCT GGTGCTGGGG
CAACGGCTAC TTAAAAATCC TGCTATGCGC CTGCGCCGGG ATAAAACCTT GCTGCGTCTG
CCCGTGACGG GCCGTGTTGC GCGCGGGCTG AATACGGCGC GTTTTTCCCG CACATTAAGC
ATCCTCACCG CCAGCAGTGT TCCGCTACTG GAAGGCATTC AGACCGCTGC CGCCGTGTCG
GCAAATCGCT ATGTCGAACA ACAACTACTG CTGGCGGCAG ATCGCGTCCG CGAAGGAAGC
AGTCTGCGTG CCGCGCTGGC GGAGTTGCGC CTGTTCCCCC CGATGATGCT GTACATGATC
GCCTCCGGCG AACAGAGCGG CGAACTGGAA ACCATGCTTG AGCAGGCCGC TGTTAACCAG
GAACGGGAAT TTGATACCCA GGTGGGGCTG GCGTTAGGGC TGTTTGAACC GGCGCTGGTG
GTGATGATGG CGGGCGTGGT GCTGTTTATC GTCATCGCCA TCCTCGAGCC GATGCTGCAA
CTGAACAATA TGGTTGGAAT GTAA
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| Protein sequence | MALFYYQALE RNGRKTKGMI EADSARHARQ LLRGKELIPV HIEARMNTSS GGMLQRRRHA
HRRVAAADLA LFTRQLATLV QAAMPLETCL QAVSEQSEKL HVKSLGMALR SRIQEGYTLS
DSLREHPRVF DSLFCSMVAA GEKSGHLDVV LNRLADYTEQ RQRLKSRLLQ AMLYPLVLLV
VATGVVTILL TAVVPKIIEQ FDHLGHALPA TTRALIAMSD ALQASGVYWL AGLLALLVLG
QRLLKNPAMR LRRDKTLLRL PVTGRVARGL NTARFSRTLS ILTASSVPLL EGIQTAAAVS
ANRYVEQQLL LAADRVREGS SLRAALAELR LFPPMMLYMI ASGEQSGELE TMLEQAAVNQ
EREFDTQVGL ALGLFEPALV VMMAGVVLFI VIAILEPMLQ LNNMVGM
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