| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3096 |
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| Symbol | speA |
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| ID | 5595215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 3111562 |
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| End bp | 3113538 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640922215 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001459715 |
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| Protein GI | 157162397 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG ACATGTCTAT GGGTTTGCCT TCGTCAGCGG GCGAACACGG TGTACTACGC
TCCATGCAGG AGGTTGCAAT GAGCTCCCAG GAAGCCAGCA AGATGCTGCG TACTTACAAT
ATTGCCTGGT GGGGCAATAA CTACTATGAC GTTAACGAGC TGGGCCACAT CAGCGTGTGC
CCGGACCCGG ACGTCCCGGA AGCTCGCGTC GATCTCGCGC AGTTAGTGAA AACTCGTGAA
GCACAGGGTC AGCGTCTGCC TGCACTGTTC TGTTTCCCAC AGATCCTGCA GCACCGTTTG
CGTTCCATTA ACGCCGCGTT CAAACGTGCG CGGGAATCCT ACGGCTATAA CGGCGATTAC
TTCCTTGTTT ATCCGATCAA AGTTAACCAG CACCGCCGCG TGATTGAGTC CCTGATTCAT
TCGGGCGAAC CGCTGGGACT GGAAGCAGGC TCGAAAGCAG AGTTGATGGC GGTGCTGGCA
CATGCTGGCA TGACCCGTAG CGTCATCGTC TGCAACGGTT ATAAAGACCG CGAATATATC
CGCCTGGCAT TAATTGGCGA GAAGATGGGC CACAAGGTCT ACCTGGTCAT TGAGAAGATG
TCAGAAATCG CCATTGTGCT GGATGAAGCA GAACGTCTGA ATGTCGTTCC TCGTCTGGGC
GTGCGTGCAC GTCTGGCTTC GCAGGGCTCG GGTAAATGGC AGTCCTCCGG CGGGGAAAAA
TCGAAGTTCG GCCTGGCTGC GACTCAGGTA CTGCAACTGG TTGAAACCCT GCGTGAAGCC
GGGCGTCTCG ACAGCCTGCA ACTACTGCAC TTCCACCTCG GTTCGCAGAT GGCGAATATT
CGCGATATCG CCACAGGCGT TCGTGAATCG GCGCGTTTCT ATGTGGAACT GCACAAGCTG
GGCGTCAATA TTCAGTGCTT CGACGTCGGC GGCGGTCTGG GCGTGGACTA TGAAGGCACC
CGTTCGCAGT CTGACTGCTC CGTAAACTAC GGCCTCAATG AATATGCCAA CAACATCATC
TGGGCGATTG GTGATGCGTG TGAAGAAAAC GGTCTGCCGC ATCCGACGGT AATCACCGAA
TCGGGTCGTG CGGTGACTGC GCATCACACC GTGCTGGTGT CTAATATCAT CGGCGTGGAA
CGTAACGAAT ACACGGTGCC GACCGCGCCT GCAGAAGATG CGCCGCGCGC GCTGCAAAGC
ATGTGGGAAA CCTGGCAGGA GATGCACGAA CCGGGAACTC GCCGTTCTCT GCGTGAATGG
TTACACGACA GTCAGATGGA TCTGCACGAC ATTCATATCG GCTACTCTTC CGGCACCTTT
AGCCTGCAAG AACGTGCATG GGCAGAACAA CTCTATCTGA GCATGTGCCA TGAAGTGCAG
AAGCAACTGG ATCCGCAAAA CCGTGCGCAT CGTCCGATAA TCGACGAACT GCAGGAACGT
ATGGCGGACA AAATGTACGT CAATTTCTCG CTGTTCCAGT CAATGCCGGA CGCATGGGGG
ATCGACCAGT TGTTCCCGGT TCTGCCGCTG GAAGGGCTGG ATCAAGTGCC GGAACGTCGC
GCTGTGCTGC TGGATATTAC CTGTGACTCT GACGGTGCTA TCGACCACTA TATTGATGGT
GATGGTATTG CCACGACAAT GCCAATGCCG GAGTACGATC CAGAGAATCC GCCGATGCTC
GGTTTCTTTA TGGTCGGCGC ATATCAGGAG ATCCTTGGCA ATATGCACAA CCTGTTCGGT
GATACCGAAG CGGTTGACGT GTTCGTGTTC CCTGACGGTA GCGTAGAAGT AGAACTGTCT
GACGAAGGCG ATACCGTGGC GGACATGCTG CAATATGTAC AGCTCGATCC GAAAACGCTG
TTAACCCAGT TCCGCGATCA AGTGAAGAAA ACCGATCTTG ATGCTGAACT GCAACAACAG
TTCCTTGAAG AGTTCGAGGC AGGTTTGTAC GGTTATACTT ATCTTGAAGA TGAGTAA
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| Protein sequence | MSDDMSMGLP SSAGEHGVLR SMQEVAMSSQ EASKMLRTYN IAWWGNNYYD VNELGHISVC
PDPDVPEARV DLAQLVKTRE AQGQRLPALF CFPQILQHRL RSINAAFKRA RESYGYNGDY
FLVYPIKVNQ HRRVIESLIH SGEPLGLEAG SKAELMAVLA HAGMTRSVIV CNGYKDREYI
RLALIGEKMG HKVYLVIEKM SEIAIVLDEA ERLNVVPRLG VRARLASQGS GKWQSSGGEK
SKFGLAATQV LQLVETLREA GRLDSLQLLH FHLGSQMANI RDIATGVRES ARFYVELHKL
GVNIQCFDVG GGLGVDYEGT RSQSDCSVNY GLNEYANNII WAIGDACEEN GLPHPTVITE
SGRAVTAHHT VLVSNIIGVE RNEYTVPTAP AEDAPRALQS MWETWQEMHE PGTRRSLREW
LHDSQMDLHD IHIGYSSGTF SLQERAWAEQ LYLSMCHEVQ KQLDPQNRAH RPIIDELQER
MADKMYVNFS LFQSMPDAWG IDQLFPVLPL EGLDQVPERR AVLLDITCDS DGAIDHYIDG
DGIATTMPMP EYDPENPPML GFFMVGAYQE ILGNMHNLFG DTEAVDVFVF PDGSVEVELS
DEGDTVADML QYVQLDPKTL LTQFRDQVKK TDLDAELQQQ FLEEFEAGLY GYTYLEDE
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