Gene EcHS_A3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3090 
Symbol 
ID5593241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3104982 
End bp3106205 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content50% 
IMG OID640922209 
ProductPTS system, mannitol-specific cryptic EIICB component, truncation 
Protein accessionYP_001459709 
Protein GI157162391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCT ATTTATTGCC CGTGATGATT GGTTCTACAG GTGGTCATCT GGTCGGCGGT 
AAACGCGGGG CGGTCATGGG CGGAATAGGT ACTATTGGTG TGATCGTTGG CGCAGAGATC
CCGATGTTCC TTGGCTCAAT GATCATGGGG CCGCTCGGTG GGTTGGTCAT AAAATATGTC
GATAAGGCAC TGGAAAAACG CATACCTGCC GGTTTTGAGA TGGTTATCAA TAACTTCTCA
TTAGGTATCG CGGGGATGCT CCTTTGTCTG CTGGGTTTTG AAGTTATCGG CCCGGCGGTG
TTAATTGCCA ATACTTTCGT CAAAGAGTGT ATTGAGGCGC TGGTACATGC GGGTTATCTG
CCATTGTTGT CAGTCATCAA TGAACCGGCG AAAGTGCTTT TCCTCAATAA TGCGATCGAT
CAGGGCGTCT ATTATCCGCT GGGAATGCAA CAGGCTTCGG TTAACGGTAA ATCCATCTTC
TTTATGGTGG CCTCTAACCC AGGTCCGGGC CTGGGGCTGC TGCTGGCGTT TACCTTGTTT
GGTAAAGGGA TGAGTAAACG TTCTGCGCCC GGGGCGATGA TTATTCACTT CCTCGGTGGG
ATCCACGAAC TGTATTTCCC GTATGTGCTG ATGAAGCCGC TGACCATTAT TGCCATGATT
GCGGGCGGTA TGTCTGGCAC CTGGATGTTT AACTTACTGG ACGGTGGTCT GGTGGCTGGC
CCAAGTCCGG GGTCTATCTT TGCTTACCTG GCACTGACGC CGAAAGGCTC GTTCCTGGCG
ACAATTGCCG GTGTTACGGT AGGTACCCTG GTGTCCTTTG CTATTACTTC GCTGATACTG
AAGATGGAAA AAACGGTGGA AACGGAGAGC GAAGATGAGT TTGCTCAGTC AGCCAATGCG
GTTAAGGCGA TGAAACAAGA GGGTGCATTC TCGTTAAGCA GGGTTAAGCG TATCGCCTTT
GTTTGCGATG CGGGGATGGG CTCCAGTGCG ATGGGCGCGA CCACCTTCCG TAAACGCCTG
GAAAAAGCGG GGCTGGCAAT TGAAGTAAAA CATTACGCCA TAGAAAACGT GCCTGCGGAT
GCGGATATCG TCGTTACTCA TGCCAGTCTG GAAGGGCGCG TGAAACGTGT GACGGATAAA
CCACTGATAT TGATTAATAA CTATATTGGC GATCCAAAAC TCGACACTTT ATTTAATCAA
TTAACCGCCG AACATAAACA CTGA
 
Protein sequence
MITYLLPVMI GSTGGHLVGG KRGAVMGGIG TIGVIVGAEI PMFLGSMIMG PLGGLVIKYV 
DKALEKRIPA GFEMVINNFS LGIAGMLLCL LGFEVIGPAV LIANTFVKEC IEALVHAGYL
PLLSVINEPA KVLFLNNAID QGVYYPLGMQ QASVNGKSIF FMVASNPGPG LGLLLAFTLF
GKGMSKRSAP GAMIIHFLGG IHELYFPYVL MKPLTIIAMI AGGMSGTWMF NLLDGGLVAG
PSPGSIFAYL ALTPKGSFLA TIAGVTVGTL VSFAITSLIL KMEKTVETES EDEFAQSANA
VKAMKQEGAF SLSRVKRIAF VCDAGMGSSA MGATTFRKRL EKAGLAIEVK HYAIENVPAD
ADIVVTHASL EGRVKRVTDK PLILINNYIG DPKLDTLFNQ LTAEHKH