Gene EcHS_A3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3080 
Symbol 
ID5595261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3094851 
End bp3095591 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID640922199 
Producthypothetical protein 
Protein accessionYP_001459699 
Protein GI157162381 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTTCA AAGTTATCGC CCTGGCGGCA TTAATGGGTA TTAGCGGGAT GGCAGCGCAG 
GCTAACGAAT TGCCGGATGG ACCGCATATT GTCACCTCCG GTACGGCAAG CGTTGATGCG
GTGCCAGACA TTGCCACTCT TGCGATTGAA GTTAACGTGG CCGCGAAGGA TGCCGCTACT
GCCAAGAAAC AGGCAGATGA GCGCGTCGCA CAATACATTT CCTTCCTTGA ACTCAATCAG
ATCGCGAAAA AAGATATCAG CTCAGCGAAC TTACGCACCC AGCCAGATTA TGATTATCAG
GATGGTAAAA GTATCCTTAA AGGCTACCGC GCTGTGAGAA CGGTGGAAGT CACGCTCCGT
CAGTTAGACA AACTGAATTC CTTGCTGGAT GGCGCGCTGA AGGCGGGTCT TAACGAAATT
CGTTCTGTGT CGCTGGGCGT GGCGCAGCCG GATGCCTATA AAGACAAAGC GCGTAAGGCA
GCGATTGATA ACGCGATTCA TCAGGCGCAG GAACTGGCGA ACGGCTTTCA TCGTAAACTG
GGGCCGGTAT ATAGCGTGCG CTACCATGTT TCCAACTATC AGCCCAGCCC AATGGTGCGG
ATGATGAAAG CCGATGCCGC GCCGGTGTCC GCCCAGGAAA CTTACGAGCA GGCCGCTATT
CAGTTTGATG ATCAGGTCGA TGTGGTCTTC CAGTTAGAAC CTGTGGATCA ACAACCCGCT
AAAACACCTG CAGCACAATA A
 
Protein sequence
MKFKVIALAA LMGISGMAAQ ANELPDGPHI VTSGTASVDA VPDIATLAIE VNVAAKDAAT 
AKKQADERVA QYISFLELNQ IAKKDISSAN LRTQPDYDYQ DGKSILKGYR AVRTVEVTLR
QLDKLNSLLD GALKAGLNEI RSVSLGVAQP DAYKDKARKA AIDNAIHQAQ ELANGFHRKL
GPVYSVRYHV SNYQPSPMVR MMKADAAPVS AQETYEQAAI QFDDQVDVVF QLEPVDQQPA
KTPAAQ