| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A3061 |
|---|
| Symbol | |
|---|
| ID | 5593941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 3072671 |
|---|
| End bp | 3073414 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640922178 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001459680 |
|---|
| Protein GI | 157162362 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 77 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAG CACTTGTGAC CGGTGGCAGT CGCGGCATCG GGCGGGCAAC TGCATTACTG
TTGGCGAAAG AAGAGTATAC GGTGGCGGTT AATTATCAAC AAAACCTCCA TGCGGCGCAG
GAAGTGGTGA ACTTAATCAC GCAAGCCGGT GGCAAGGCAT TCGTGCTCCA GGCGGATATC
AGCGACGAAA ATCAGGTCAT CGCAATGTTT ACAGCAATCG ATCAGCACGA TGAACCGCTA
GCAGCGCTGG TCAATAACGC CGGGATCTTG TTTACCCAGT GCACCGTTGA AAACCTTACC
GCAGAGCGAA TCAACCGAGT ACTTTCCACC AACGTGACGG GATATTTTCT CTGCTGCCGC
GAGGCGGTAA AACGCATGGC GCTTAAAAAT GGTGGCAGTG GCGGCGCTAT CGTCAATGTC
TCTTCGGTGG CCTCACGGTT GGGTTCGCCA GGGGAATATG TTGATTACGC GGCATCGAAA
GGGGCGATTG ATACGTTAAC CACCGGACTA TCGCTGGAAG TCGCCGCGCA GGGGATCCGC
GTTAACTGCG TGCGGCCAGG GTTTATTTAT ACCGAAATGC ACGCCAGCGG CGGCGAGCCT
GGACGCGTCG ATCGCGTTAA GTCGAACATC CCCATGCAGC GTGGTGGACA GGCAGAAGAG
GTCGCGCAGG CCATTGTCTG GCTACTAAGT GATAAAGCCT CTTACGTCAC GGGAAGTTTT
ATCGATTTGG CGGGCGGGAA ATAA
|
|---|
| Protein sequence | MAIALVTGGS RGIGRATALL LAKEEYTVAV NYQQNLHAAQ EVVNLITQAG GKAFVLQADI
SDENQVIAMF TAIDQHDEPL AALVNNAGIL FTQCTVENLT AERINRVLST NVTGYFLCCR
EAVKRMALKN GGSGGAIVNV SSVASRLGSP GEYVDYAASK GAIDTLTTGL SLEVAAQGIR
VNCVRPGFIY TEMHASGGEP GRVDRVKSNI PMQRGGQAEE VAQAIVWLLS DKASYVTGSF
IDLAGGK
|
|---|
| |