Gene EcHS_A2838 details

Gene Information

• Locus tag: EcHS_A2838
• Symbol: srlA
• ID: 5594524
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 2843249
• End bp: 2843812
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640921955
• Product: PTS system, glucitol/sorbitol-specific, IIC component
• Protein accession: YP_001459466
• Protein GI: 157162148
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3730] Phosphotransferase system sorbitol-specific component IIC
• TIGRFAM ID: [TIGR00821] PTS system, glucitol/sorbitol-specific, IIC component

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGAAA CCATTACTCA TGGTGCTGAG TGGTTTATCG GGCTGTTCCA AAAGGGCGGA 
GAGGTGTTTA CCGGGATGGT GACCGGCATT CTTCCGCTGT TGATTAGCCT GCTGGTTATC 
ATGAACGCAC TGATTAATTT TATCGGTCAG CATCGTATTG AACGTTTTGC TCAACGTTGC 
GCCGGTAACC CTGTTTCCCG TTACCTGCTG TTACCGTGCA TTGGCACGTT TGTCTTTTGC 
AATCCGATGA CCTTAAGCCT GGGTCGCTTT ATGCCGGAAA AGTACAAACC CAGCTACTAC 
GCGGCGGCCT CTTATAGCTG CCACTCAATG AATGGCCTCT TCCCCCATAT CAACCCTGGC 
GAACTGTTTG TTTATCTTGG CATTGCCAGC GGTCTGACAA CGCTGAACCT GCCACTTGGC 
CCACTGGCGG TGAGTTATCT GCTGGTTGGT CTGGTCACCA ACTTCTTCCG CGGCTGGGTG 
ACCGATCTGA CCACCGCCAT TTTTGAGAAA AAGATGGGCA TTCAACTTGA ACAAAAAGTT 
CACCTGGCAG GAGCAACATC ATGA 

 

Protein sequence

MIETITHGAE WFIGLFQKGG EVFTGMVTGI LPLLISLLVI MNALINFIGQ HRIERFAQRC 
AGNPVSRYLL LPCIGTFVFC NPMTLSLGRF MPEKYKPSYY AAASYSCHSM NGLFPHINPG 
ELFVYLGIAS GLTTLNLPLG PLAVSYLLVG LVTNFFRGWV TDLTTAIFEK KMGIQLEQKV 
HLAGATS