Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2817 |
Symbol | |
ID | 5595479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2825859 |
End bp | 2827043 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640921933 |
Product | major facilitator family transporter |
Protein accession | YP_001459450 |
Protein GI | 157162132 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAC CTAATCATGA GCTTAGCCCG GCGCTGATCG TGCTGATGTC TATCGCCACC GGTCTGGCGG TCGCCAGTAA CTATTACGCT CAGCCATTGC TCGACACCAT CGCGCGTAAC TTTTCCCTTT CCGCCAGTTC GGCAGGCTTT ATTGTTACCG CCGCGCAATT GGGCTATGCA GCAGGTCTGC TGTTTCTTGT TCCCCTCGGT GATATGTTTG AACGCCGCCG CCTGATTGTC TCGATGACCT TACTGGCGGC AGGCGGCATG TTAATCACTG CCAGCAGTCA GTCGCTGGCG ATGATGATCC TCGGTACGGC ATTAACCGGT TTATTCTCTG TCGTGGCACA AATTCTGGTT CCGCTGGCAG CGACGCTGGC TTCACCGGAC AAACGCGGCA AAGTGGTTGG CACTATTATG AGCGGTCTGC TGTTGGGGAT CTTGCTGGCA CGGACAGTTG CCGGATTGCT GGCGAATCTC GGCGGCTGGC GCACCGTCTT TTGGGTTGCT TCGGTGTTAA TGGCACTGAT GGCGCTGGCA TTATGGCGTG GTCTGCCACA AATGAAATCA GAAACCCACC TCAACTACCC ACAGTTGTTG GGTTCCGTTT TCAGTATGTT TATCAGCGAT AAAATTCTGC GTACCCGCGC GTTGCTGGGC TGCCTGACCT TTGCCAATTT CAGCATTCTC TGGACCTCAA TGGCCTTTTT GCTTGCCGCT CCACCTTTTA ACTACAGCGA TGGTGTAATT GGTCTGTTTG GACTTGCGGG AGCTGCCGGA GCGTTGGGCG CTCGTCCGGC GGGCGGTTTT GCCGATAAGG GCAAATCGCA CCACACCACA ACTTTCGGTC TGCTGCTGCT ATTACTTTCA TGGCTGGCGA TCTGGTTTGG TCACACTTCC GTACTGGCGT TGATTATCGG AATCCTGGTG CTGGATCTCA CCGTGCAGGG CGTGCATATC ACTAACCAGA CGGTAATTTA TCGGATACAT CCTGATGCGC GCAATCGCCT GACCGCAGGT TACATGACTA GCTACTTTAT TGGCGGTGCC GCCGGTTCGC TAATTTCAGC CTCAGCCTGG CAACATGGCG GTTGGGCTGG CGTTTGTCTG GCTGGCGCGA CGATTGCCCT GGTTAACTTA CTGGTCTGGT GGCGAGGTTT TCATCGTCAG GAAGCCGCAA ATTAA
|
Protein sequence | MTKPNHELSP ALIVLMSIAT GLAVASNYYA QPLLDTIARN FSLSASSAGF IVTAAQLGYA AGLLFLVPLG DMFERRRLIV SMTLLAAGGM LITASSQSLA MMILGTALTG LFSVVAQILV PLAATLASPD KRGKVVGTIM SGLLLGILLA RTVAGLLANL GGWRTVFWVA SVLMALMALA LWRGLPQMKS ETHLNYPQLL GSVFSMFISD KILRTRALLG CLTFANFSIL WTSMAFLLAA PPFNYSDGVI GLFGLAGAAG ALGARPAGGF ADKGKSHHTT TFGLLLLLLS WLAIWFGHTS VLALIIGILV LDLTVQGVHI TNQTVIYRIH PDARNRLTAG YMTSYFIGGA AGSLISASAW QHGGWAGVCL AGATIALVNL LVWWRGFHRQ EAAN
|
| |