Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2797 |
Symbol | gabT2 |
ID | 5593221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2810179 |
End bp | 2811459 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640921913 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_001459430 |
Protein GI | 157162112 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CGATTCCCCG TGGTGTTGGG CAAATTCACC CGATTTTCGC TGACCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC CGTGAGTATC TTGATTTCGC GGGCGGGATT GCGGTGCTCA ATACCGGGCA CTTGCATCCG AAAGTGGTGG CTGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG CTGGCCTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCAGGCAAT TTTGCCAAGA AAACGCTGCT GGTCACCACA GGTTCTGAAG CGGTGGAAAA CGCGGTGAAA ATCGCCCGCG CCGCCACCAA ACGTAGCGGC ACCATCGCTT TTAGCGGCGC GTATCACGGG CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGG CTGATGCCGG GTCATGTTTA TCGCGCGCTT TATCCTTGCC CGCTGCACGG CATAAGCGAG GATGACGCTA TCGCCAGCAT CCACCGGATC TTCAAAAATG ATGCCGCGCC GGAAGATATC GCCGCCATCG TGATTGAGCC GGTTCAGGGC GAAGGCGGTT TCTACGCCTC GTCGCCAGCC TTTATGCAGC GTTTACGCGC TCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA GTGCAGAGCG GCGCGGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAGAT GGGCGTTGCG CCGGATCTTA CCACCTTTGC GAAATCGATC GCGGGCGGCT TCCCGCTGGC GGGCGTCACC GGGCGCGCGG AAGTAATGGA TGCCGTCGCT CCAGGCGGTC TGGGCGGCAC CTATGCGGGT AACCCGATTG CCTGCGTGGC TGCGCTGGAA GTGTTGAAGG TGTTTGAGCA GGAAAATCTG CTGCAAAAAG CCAACGATCT GGGGCAGAAG TTGAAAGACG GATTGCTGGC GATAGCCGAA AAACACCCGG AGATCGGCGA CGTACGCGGG CTGGGGGCGA TGATCGCCAT TGAGCTGTTT GAAGACGGCG ATCACAACAA GCCGGACGCC AAACTCACCG CCGAGATCGT GGCTCGCGCC CGCGATAAAG GCCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT GTACCGCTCA CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT TTTGATGAGG CGAAGCAGTA G
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Protein sequence | MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGN FAKKTLLVTT GSEAVENAVK IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYASSPA FMQRLRALCD EHGIMLIADE VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF EDGDHNKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC FDEAKQ
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