| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2684 |
|---|
| Symbol | |
|---|
| ID | 5591533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2700140 |
|---|
| End bp | 2700880 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640921802 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001459326 |
|---|
| Protein GI | 157162008 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00000664328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA ATATTCGAAT TGTGCTGGTG GAGACGTCAC ACACCGGCAA TATGGGTTCT
GTTGCCCGTG CCATGAAAAC AATGGGATTA ACCAATCTGT GGCTGGTTAA TCCACTGGTG
AAACCCGACT CCCAGGCGAT TGCCCTGGCA GCAGGGGCCA GCGATGTGAT TGGTAATGCT
CACATCGTCG ATACGCTCGA CGAAGCGTTA GCCGGTTGTA GCCTGGTGGT GGGCACCAGC
GCACGCTCCC GCACGCTGCC GTGGCCGATG CTCGACCCGC GCGAATGCGG TCTGAAAAGC
GTCGCTGAAG CGGCAAATAC CCCGGTGGCG CTGGTGTTTG GTCGTGAGCG CGTCGGCTTG
ACCAATGAAG AGTTGCAGAA ATGCCATTAT CATGTCGCGA TTGCGGCTAA CCCGGAATAC
AGCTCGCTGA ACCTGGCGAT GGCGGTTCAG GTTATTGCCT ATGAAGTGCG CATGGCCTGG
CTGGCAACTC AGGAAAATGG CGAGCAGGTC GAGCATGAAG AGACGCCGTA TCCGCTGGTC
GATGATCTGG AGCGTTTTTA TGGTCATCTG GAACAAACGC TGCTGGCAAC CGGTTTTATC
CGTGAAAACC ATCCGGGGCA GGTGATGAAT AAATTGCGCC GTCTGTTTAC CCGTGCGCGC
CCGGAAAGCC AGGAATTGAA TATCCTGCGC GGGATTCTGG CTTCTATTGA GCAGCAGAAT
AAAGGTAACA AGGCCGAATA A
|
|---|
| Protein sequence | MLQNIRIVLV ETSHTGNMGS VARAMKTMGL TNLWLVNPLV KPDSQAIALA AGASDVIGNA
HIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LDPRECGLKS VAEAANTPVA LVFGRERVGL
TNEELQKCHY HVAIAANPEY SSLNLAMAVQ VIAYEVRMAW LATQENGEQV EHEETPYPLV
DDLERFYGHL EQTLLATGFI RENHPGQVMN KLRRLFTRAR PESQELNILR GILASIEQQN
KGNKAE
|
|---|
| |