Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2670 |
Symbol | pbpC |
ID | 5594983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2682652 |
End bp | 2684964 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640921786 |
Product | penicillin-binding protein 1C |
Protein accession | YP_001459312 |
Protein GI | 157161994 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGCT TGTTAACCAA ACGCGGCTGC TGGATAACGT TGGCAGCCGC GCCCTTTCTC CTTTTTCTTG CAGCGTGGGG AGCAGATAAA CTCTGGCCTC TACCGCTGCA TGAAGTCAAT CCCGCACGAG TGGTCGTGGC GCAGGATGGT ACGCCGCTCT GGCGCTTCGC CGATGCTGAC GGCATCTGGC GTTATCCGGT AACAATCGAA GATGTTTCTC CACGTTACCT TGAAGCGCTG ATCAATTATG AAGATCGCTG GTTCTGGAAG CATCCGGGGG TGAATCCATT CTCGGTGGCG CGCGCAGCAT GGCAAGATCT CACTTCGGGA CGGGTTATTT CCGGTGGCAG CACGCTCACT ATGCAGGTTG CTCGTCTGCT TGATCCTCAC CCCAAAACAT TTGGCGGCAA AATTCGCCAG CTCTGGCGCG CGTTGCAACT GGAATGGCAT CTGTCTAAGC GTGAAATTCT GACCTTGTAT CTTAACCGCG CTCCGTTTGG CGGTACGTTG CAGGGGATCG GTGCGGCAAG TTGGGCTTAT CTCGGAAAAT CGCCTGCGAA TTTAAGCTAT TCCGAGGCGG CAATGCTGGC GGTTTTGCCG CAAGCGCCCA GCCGTCTTCG CCCGGATCGT TGGCCGGAGC GTGCCGAAGC CGCGCGTAAT AAAGTGCTCG AACGGATGGC CGTGCAAGGT GTGTGGTCCC GTGAGCAGGT AAAAGAGTCA AGGGAAGAAC CCATCTGGCT GGCCCCCCGA CAAATGCCGC AACTGGCACC GCTGTTTTCG CGCATGATGC TCGGTAAAAG CAAAAGCGAC AAAATCACTA CTACGTTGGA TGCCGGTCTT CAACGACGTC TGGAAGAACT GGCGCAAAAC TGGAAAGGGC GGTTGCCACC GCGCAGCTCA CTGGCGATGA TCGTGGTTGA TCATACCGAT ATGCGTGTTC GCGGCTGGGT GGGATCGGTT GATCTCAACG ATGATTCACG CTTTGGTCAT GTTGATATGG TCAATTCGAT CCGATCGCCA GGATCAGTGC TCAAACCGTT TGTTTATGGT CTGGCGCTGG ATGAAGGCTT GATCCACCCG GCATCACTGC TGCAAGACGT CCCCCGGCGC ACCGGTGATT ATCGACCAGG TAACTTTGAT AGCGGTTTTC ATGGCCCGAT CAGCATGAGC GAGGCGCTGG TGCGCTCGCT GAACTTACCT GCTGTGCAGG TGCTGGAAGC CTATGGACCG AAACGGTTTG CGGCAAAGTT ACGCAATGTT GGATTGCCGT TATATTTGCC CAACGGTGCT GCGCCGAATC TTTCACTCAT TCTCGGCGGC GCTGGTGCAA AACTGGAAGA TATGGCGGCA GCGTATACCG CGTTTGCTCG CCACGGCAAG GCAGGCAAAT TGCGCTTACA GCCTGACGAT CCGCTGCTTG AACGGCCTTT AATGTCGTCG GGGGCGGCGT GGATCATTCG CCGGATTATG GCTGATGAAG CGCAACCCTT GCCGGATAGT GCCTTGCCGC GCGTCGCCCC ACTGGCATGG AAAACGGGCA CCAGCTATGG CTATCGTGAC GCCTGGGCGA TTGGGGTTAA CGCTCGCTAT GTCATTGGGA TCTGGACTGG CAGACCGGAC GGCACGCCCG TTGTTGGTCA GTTTGGCTTT GCCAGTGCCG TACCATTGTT GAATCAGGTC AATAATATCT TACTGTCGCG CAGTGCGAAT CTGCCGGAAG ACCCGCGCCC GAACTCAGCC ACTCGTGGCG TTATCTGCTG GCCGGGCGGA CAGTCTTTGC CGGAAGGTGA CGGTAACTGT CGCCGCCGCC TGGCAACCTG GCTGCTGGAC GGGAGTCAGC CGCCAACTCT ATTACTGCCG GAGCAGGAAG GCATTAATGG CATTCGTTTC CCCATCTGGC TGGATGAAAA TGGCAAACGT GTTGCCGCTG ATTGCCCGCA AGCGCGACAA GAAATGATAA ATGTCTGGCC GCTACCGCTG GAACCCTGGC TGCCCGCATC AGAACGTCGC GCTGTGCGCT TACCACCGGC CTCGACAAGT TGCCCGCCAT ACGGTCACGA TGCCCAGCTC CCGCTGCAGC TGACAGGCGT TCGCGATGGC GCGATTATTA AACGTTTACC GGGCGCAGCG GAAGCGACTT TGCCGTTGCA ATCAAGTGGA GGGGCAGGTG AACGCTGGTG GTTTCTGAAT GGCGAACCGT TAACTGAACG CGGGCGCAAC GTGACCCTGC ATTTGACGGA TAAAGGTGAT TATCAATTGC TGGTGATGGA TGACGTGGGG CAAATCGCGA CAGTGAAATT TGTCATGCAA TAG
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Protein sequence | MPRLLTKRGC WITLAAAPFL LFLAAWGADK LWPLPLHEVN PARVVVAQDG TPLWRFADAD GIWRYPVTIE DVSPRYLEAL INYEDRWFWK HPGVNPFSVA RAAWQDLTSG RVISGGSTLT MQVARLLDPH PKTFGGKIRQ LWRALQLEWH LSKREILTLY LNRAPFGGTL QGIGAASWAY LGKSPANLSY SEAAMLAVLP QAPSRLRPDR WPERAEAARN KVLERMAVQG VWSREQVKES REEPIWLAPR QMPQLAPLFS RMMLGKSKSD KITTTLDAGL QRRLEELAQN WKGRLPPRSS LAMIVVDHTD MRVRGWVGSV DLNDDSRFGH VDMVNSIRSP GSVLKPFVYG LALDEGLIHP ASLLQDVPRR TGDYRPGNFD SGFHGPISMS EALVRSLNLP AVQVLEAYGP KRFAAKLRNV GLPLYLPNGA APNLSLILGG AGAKLEDMAA AYTAFARHGK AGKLRLQPDD PLLERPLMSS GAAWIIRRIM ADEAQPLPDS ALPRVAPLAW KTGTSYGYRD AWAIGVNARY VIGIWTGRPD GTPVVGQFGF ASAVPLLNQV NNILLSRSAN LPEDPRPNSA TRGVICWPGG QSLPEGDGNC RRRLATWLLD GSQPPTLLLP EQEGINGIRF PIWLDENGKR VAADCPQARQ EMINVWPLPL EPWLPASERR AVRLPPASTS CPPYGHDAQL PLQLTGVRDG AIIKRLPGAA EATLPLQSSG GAGERWWFLN GEPLTERGRN VTLHLTDKGD YQLLVMDDVG QIATVKFVMQ
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