Gene EcHS_A2625 details

Gene Information

• Locus tag: EcHS_A2625
• ID: 5590985
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 2633903
• End bp: 2635849
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640921742
• Product: formate hydrogenlyase transcriptional activator
• Protein accession: YP_001459269
• Protein GI: 157161951
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGCGG AGCGGTTAGC GCAGAAACAC GGTAAGGCGT CTTTATTACG CGCCTTCATC 
CCGCTGCCGC CGCCGTTCAG CCCGGTACAA CTTATTGAAC TGCATGTTCT CAAAAGCAAC 
TTCTATTACC GCTACCATGA TGATGGCAGC GATGTGACGG CAACAACAGA GTATCAGGGC 
GAGATGGTCG ATTATTCGCG TCACGCCGTC CTTCTCGGCA GTAGTGGAAT GGCGGAGCTA 
CGCTTTATTC GCACCCACGG CAGTCGTTTT ACTCCCCAGG ATTGCACACT GTTTAACTGG 
CTGGCGCGGA TAATCACCCC GGTTCTGCAA TCATGGCTCA ATGATGAAGA ACAGCAGGTG 
GCGCTGCGTT TGCTGGAGAA AGATCGCGAT CATCATCGGG TACTGGTTGA TATTACTAAT 
GCAGTGCTGT CACATCTTGA TCTCGACGAT CTGATCGCTG ACGTCGCTCG TGAGATCCAT 
CATTTTTTCG GTCTGGCTTC AGTCAGTATG GTACTGGGCG ATCATCGAAA GAACGAGAAG 
TTTAGCCTGT GGTGCAGCGA TCTTTCTGCC TCACATTGTG CGTGTCTGCC ACGCAATATG 
CCTGGCGACA GTGTATTGCT GACACAAACG CTACAAACCC GACAACCGAC CTTGACGCAC 
CGTGCAGACG ATCTGTTTCT CTGGCAACGC GACCCGTTAT TACTCTTACT TGCATCTAAC 
GGCTGCGAAT CTGCGCTCCT TATACCGCTT ACCTTTGGCA ACCATACACC GGGTGCATTG 
TTGCTGGCGC ATACCTCTTC CACTCTCTTT AGTGAGGAAA ACTGCCAGCT ACTACAACAC 
ATAGCCGATC GCATCGCTAT TGCCGTTGGC AATGCCGATG CCTGGCGTAG CATGACCGAT 
TTGCAGGAAA GTTTGCAGCA AGAAAACCAC CAGCTTAGCG AGCAGCTCCT TTCGAATCTG 
GGCATCGGTG ACATTATCTA TCAAAGCCAG GCAATGGAAG ACCTACTCCA GCAGTTAGAT 
ATTGTGGCGA AGAGCGACAG TACGGTGTTG ATTTGCGGTG AAACCGGAAC CGGCAAAGAG 
GTGATCGCCA GAGCGATCCA TCAACTTAGC CCGCGACGCG ACAAGCCGCT GGTCAAAATC 
AACTGCGCTG CCATCCCCGC CAGTCTTCTG GAAAGTGAGT TATTCGGTCA TGACAAAGGG 
GCGTTTACTG GTGCGATTAA TACCCATCGT GGTCGTTTTG AAATTGCCGA TGGCGGCACG 
TTGTTTCTCG ATGAAATTGG CGATCTGCCG TTAGAACTTC AGCCTAAACT GCTGCGCGTA 
TTGCAGGAAC GGGAGATTGA GCGTCTCGGC GGGAGTAGAA CGATCCCGGT AAATGTCAGA 
GTCATTGCCG CCACCAACCG TGATTTGTGG CAAATGGTTG AAGATCGCCA GTTTCGCAGC 
GATCTCTTTT ATCGCCTGAA TGTCTTCCCA CTGGAATTGC CGCCGCTGCG CGACCGTCCG 
GAAGATATCC CTCTTTTAGC AAAGCATTTC ACGCAAAAAA TGGCGCGCCA TATGAATCGC 
GCAATTGACG CCATCCCGAC CGAGGCACTA CGCCAGTTGA TGTCGTGGGA TTGGCCGGGC 
AACGTGCGCG AGCTGGAAAA CGTGATTGAG CGGGCGGTAC TGTTGACTCG TGGTAACAGT 
CTGAATTTAC ATCTAAATGT CCGACAAAGC CGTTTACTGC CGACGCTAAA TGAAGATTCA 
GCGCTTCGCA GTTCAATGGC GCAGTTGCTG CACCCGACGA CGCCAGAGAA TGACGAAGAA 
GAACGTCAGC GCATTGTTCA GGTATTGCGA GAAACCAATG GCATTGTTGC CGGGCCCCGT 
GGCGCGGCGA CACGATTAGG GATGAAGCGC ACCACGCTGC TGTCACGAAT GCAGCGTCTG 
GGGATCTCGG TTCGCGAGGT GTTGTAA 

 

Protein sequence

MLAERLAQKH GKASLLRAFI PLPPPFSPVQ LIELHVLKSN FYYRYHDDGS DVTATTEYQG 
EMVDYSRHAV LLGSSGMAEL RFIRTHGSRF TPQDCTLFNW LARIITPVLQ SWLNDEEQQV 
ALRLLEKDRD HHRVLVDITN AVLSHLDLDD LIADVAREIH HFFGLASVSM VLGDHRKNEK 
FSLWCSDLSA SHCACLPRNM PGDSVLLTQT LQTRQPTLTH RADDLFLWQR DPLLLLLASN 
GCESALLIPL TFGNHTPGAL LLAHTSSTLF SEENCQLLQH IADRIAIAVG NADAWRSMTD 
LQESLQQENH QLSEQLLSNL GIGDIIYQSQ AMEDLLQQLD IVAKSDSTVL ICGETGTGKE 
VIARAIHQLS PRRDKPLVKI NCAAIPASLL ESELFGHDKG AFTGAINTHR GRFEIADGGT 
LFLDEIGDLP LELQPKLLRV LQEREIERLG GSRTIPVNVR VIAATNRDLW QMVEDRQFRS 
DLFYRLNVFP LELPPLRDRP EDIPLLAKHF TQKMARHMNR AIDAIPTEAL RQLMSWDWPG 
NVRELENVIE RAVLLTRGNS LNLHLNVRQS RLLPTLNEDS ALRSSMAQLL HPTTPENDEE 
ERQRIVQVLR ETNGIVAGPR GAATRLGMKR TTLLSRMQRL GISVREVL