Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2599 |
Symbol | acrD |
ID | 5591188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 2609502 |
End bp | 2612615 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640921720 |
Product | aminoglycoside/multidrug efflux system |
Protein accession | YP_001459247 |
Protein GI | 157161929 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATT TCTTTATTGA TCGCCCCATT TTTGCCTGGG TGCTGGCAAT CCTGTTGTGT CTGACAGGTA CCCTGGCGAT TTTCTCATTG CCCGTTGAAC AATACCCCGA TCTCGCGCCA CCGAATGTGC GAGTGACCGC TAACTATCCC GGCGCATCGG CCCAGACGCT GGAAAACACC GTGACCCAGG TTATCGAGCA AAATATGACC GGCCTCGATA ATCTCATGTA TATGTCATCT CAGAGCAGTG GCACCGGTCA GGCATCTGTC ACTTTAAGTT TTAAAGCAGG CACCGATCCG GACGAAGCCG TGCAGCAAGT ACAAAACCAG CTGCAATCAG CCATGCGAAA GTTACCGCAG GCGGTGCAAA ATCAGGGCGT GACGGTGCGT AAAACCGGCG ATACCAACAT TCTGACCATT GCCTTCGTCT CTACCGATGG TTCGATGGAT AAACAGGATA TTGCTGATTA TGTTGCCAGT AATATTCAGG ACCCGTTAAG CCGCGTGAAT GGCGTCGGGG ATATCGATGC CTATGGTTCG CAATATTCCA TGCGTATCTG GCTGGACCCG GCGAAACTCA ACAGTTTCCA GATGACGGCT AAAGATGTCA CTGATGCCAT TGAGTCACAG AACGCGCAGA TTGCGGTTGG GCAACTTGGT GGTACACCTT CCGTCGATAA GCAGGCGCTC AACGCCACCA TTAACGCCCA GTCACTGCTG CAAACACCAG AACAGTTCCG CGATATCACC TTGCGGGTCA ATCAGGACGG CTCAGAGGTA AGGCTGGGCG ATGTCGCCAC CGTCGAAATG GGGGCGGAGA AATACGATTA TCTTAGCCGC TTCAATGGTA AGCCAGCCTC CGGGCTGGGG GTAAAACTGG CCTCCGGCGC TAACGAAATG GCGACAGCGG AGCTGGTGCT CAATCGTCTC GACGAGCTGG CGCAGTATTT CCCGCATGGA CTGGAATACA AGGTGGCGTA TGAAACCACC TCGTTTGTTA AAGCCTCCAT TGAAGACGTG GTGAAAACGC TGCTGGAAGC TATCGCTCTG GTTTTCCTCG TTATGTATCT GTTCCTGCAA AACTTCCGCG CCACGCTGAT ACCCACTATC GCCGTGCCGG TGGTGTTGAT GGGAACCTTC TCCGTACTTT ACGCCTTCGG TTACAGCGTC AACACCTTAA CCATGTTCGC GATGGTGCTG GCGATCGGTC TGCTGGTGGA TGACGCCATC GTGGTGGTGG AAAACGTCGA ACGTATTATG AGTGAGGAAG GACTCACTCC TCGCGAAGCC ACACGTAAAT CGATGGGGCA GATCCAGGGG GCACTGGTCG GGATTGCGAT GGTGCTTTCG GCGGTATTTG TACCAATGGC CTTCTTCGGC GGCATCACCG GTGCCATCTA TCGCCAGTTC TCTATTACCA TTGTTGCGGC GATGGTGCTG TCAGTACTGG TAGCGATGAT CCTCACTCCG GCTCTGTGTG CCACACTACT TAAGCCACTG AAAAAAGGTG AGCATCACGG GCAAAAAGGC TTTTTTGCCT GGTTTAACCA GATGTTTAAC CGCAACGCCG AACGCTACGA AAAAGGGGTG GCGAAAATTC TCCACCGCAG CCTGCGCTGG ATTGTGATTT ATGTCCTGCT GCTTGGCGGC ATGGTGTTCC TGTTCCTGCG TTTGCCGACG TCGTTCTTAC CGCTGGAAGA CCGTGGCATG TTTACTACCT CGGTACAATT GCCCAGCGGT TCAACCCAAC AACAGACCCT GAAAGTCGTT GAGCAAATCG AGAAATATTA CTTCACCCAT GAAAAAGACA ACATCATGTC GGTGTTTGCC ACTGTTGGTT CTGGCCCTGG GGGTAACGGG CAAAACGTGG CGCGAATGTT TATCCGCCTG AAAGACTGGA GCGAACGCGA CAGTAAGACC GGCACCTCGT TTGCCATTAT CGAGCGTGCA ACAAAGGCGT TTAACCAAAT TAAAGAAGCT CGCGTTATCG CCAGCAGCCC GCCAGCAATT AGCGGTCTTG GTAGTTCTGC AGGTTTTGAT ATGGAGTTGC AGGACCACGC TGGAGCAGGT CACGATGCGC TGATGGCAGC ACGTAACCAG TTGCTGGCGC TGGCGGCGGA AAACCCGGAG CTAACCCGTG TGCGCCATAA CGGCCTCGAT GACAGTCCGC AGTTGCAGAT TGATATCGAC CAGCGTAAAG CTCAGGCGCT GGGCGTTGCT ATCGACGATA TTAACGACAC ACTGCAAACC GCCTGGGGTT CGAGCTATGT GAATGACTTT ATGGATCGCG GTCGCGTGAA GAAAGTCTAT GTGCAGGCAG CTGCGCCGTA TCGCATGCTG CCAGATGACA TCAATCTCTG GTATGTCCGA AATAAAGATG GCGGCATGGT GCCCTTCTCT GCTTTCGCGA CCTCACGCTG GGAGACAGGC TCACCGCGTC TGGAACGCTA TAACGGTTAT TCTGCGGTTG AGATTGTTGG GGAAGCCGCA CCGGGGGTCA GTACCGGTAC GACGATGGAT ATTATGGAAT CGTTAGTGAA GCAGTTGCCA AACGGCTTTG GTCTGGAGTG GACGGCGATG TCGTATCAGG AGCGGCTTTC CGGCGCGCAG GCTCCGGCGC TGTACGCTAT TTCCTTGCTG GTGGTATTCC TGTGTCTGGC TGCATTGTAT GAAAGCTGGT CGGTACCGTT CTCGGTAATG CTGGTCGTGC CGCTGGGGGT TATCGGCGCG CTGCTGGCAA CCTGGATGCG GGGGCTGGAA AACGACGTTT ACTTCCAGGT GGGCCTGTTA ACGGTCATTG GTTTATCGGC GAAAAACGCC ATCCTGATCG TCGAGTTTGC TAACGAGATG AACCAAAAAG GCCACGACCT GTTTGAAGCG ACGCTCCACG CCTGCCGTCA GCGTTTACGC CCGATTCTGA TGACCTCGCT GGCATTTATC TTCGGCGTAT TGCCAATGGC AACCAGCACG GGTGCCGGTT CCGGTGGTCA GCATGCGGTG GGTACTGGCG TAATGGGCGG GATGATTTCG GCTACTATTC TGGCTATTTA CTTCGTGCCG CTGTTCTTTG TGCTGGTGCG CCGCCGCTTC CCGCTGAAGC CGCGCCCGGA ATAA
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Protein sequence | MANFFIDRPI FAWVLAILLC LTGTLAIFSL PVEQYPDLAP PNVRVTANYP GASAQTLENT VTQVIEQNMT GLDNLMYMSS QSSGTGQASV TLSFKAGTDP DEAVQQVQNQ LQSAMRKLPQ AVQNQGVTVR KTGDTNILTI AFVSTDGSMD KQDIADYVAS NIQDPLSRVN GVGDIDAYGS QYSMRIWLDP AKLNSFQMTA KDVTDAIESQ NAQIAVGQLG GTPSVDKQAL NATINAQSLL QTPEQFRDIT LRVNQDGSEV RLGDVATVEM GAEKYDYLSR FNGKPASGLG VKLASGANEM ATAELVLNRL DELAQYFPHG LEYKVAYETT SFVKASIEDV VKTLLEAIAL VFLVMYLFLQ NFRATLIPTI AVPVVLMGTF SVLYAFGYSV NTLTMFAMVL AIGLLVDDAI VVVENVERIM SEEGLTPREA TRKSMGQIQG ALVGIAMVLS AVFVPMAFFG GITGAIYRQF SITIVAAMVL SVLVAMILTP ALCATLLKPL KKGEHHGQKG FFAWFNQMFN RNAERYEKGV AKILHRSLRW IVIYVLLLGG MVFLFLRLPT SFLPLEDRGM FTTSVQLPSG STQQQTLKVV EQIEKYYFTH EKDNIMSVFA TVGSGPGGNG QNVARMFIRL KDWSERDSKT GTSFAIIERA TKAFNQIKEA RVIASSPPAI SGLGSSAGFD MELQDHAGAG HDALMAARNQ LLALAAENPE LTRVRHNGLD DSPQLQIDID QRKAQALGVA IDDINDTLQT AWGSSYVNDF MDRGRVKKVY VQAAAPYRML PDDINLWYVR NKDGGMVPFS AFATSRWETG SPRLERYNGY SAVEIVGEAA PGVSTGTTMD IMESLVKQLP NGFGLEWTAM SYQERLSGAQ APALYAISLL VVFLCLAALY ESWSVPFSVM LVVPLGVIGA LLATWMRGLE NDVYFQVGLL TVIGLSAKNA ILIVEFANEM NQKGHDLFEA TLHACRQRLR PILMTSLAFI FGVLPMATST GAGSGGQHAV GTGVMGGMIS ATILAIYFVP LFFVLVRRRF PLKPRPE
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