Gene EcHS_A2357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2357 
SymbolrcsB 
ID5591899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2357123 
End bp2357809 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content48% 
IMG OID640921484 
Producttranscriptional regulator RcsB 
Protein accessionYP_001459018 
Protein GI157161700 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000000398144 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGAG CTTGCTGTAG CAAGGTAGCC TATTACATGA ACAATATGAA CGTAATTATT 
GCCGATGACC ATCCGATAGT CTTGTTCGGT ATTCGCAAAT CACTTGAGCA AATTGAGTGG
GTGAATGTTG TCGGCGAATT TGAAGACTCT ACAGCACTGA TCAACAACCT GCCGAAACTG
GATGCGCATG TGTTGATTAC CGATCTCTCC ATGCCTGGCG ATAAGTACGG CGATGGCATT
ACCTTAATCA AGTACATCAA GCGCCATTTC CCAAGCCTGT CGATTATTGT TCTGACCATG
AACAACAACC CGGCGATTCT TAGTGCGGTA TTGGATCTGG ATATCGAAGG GATCGTGCTG
AAACAAGGTG CACCGACCGA TCTGCCGAAA GCTCTCGCCG CGCTGCAGAA AGGGAAGAAA
TTTACCCCGG AAAGCGTTTC TCGCCTGTTG GAAAAAATCA GTGCTGGTGG TTACGGTGAC
AAGCGTCTCT CGCCAAAAGA GAGTGAAGTT CTGCGCCTGT TTGCGGAAGG CTTCCTGGTG
ACCGAGATCG CTAAAAAGCT GAACCGCAGT ATTAAAACCA TCAGTAGCCA GAAGAAATCT
GCGATGATGA AGCTGGGTGT CGAGAACGAT ATCGCCCTGC TGAATTATCT CTCTTCTGTG
ACCTTAAGTC CGGCAGATAA AGACTAA
 
Protein sequence
MSRACCSKVA YYMNNMNVII ADDHPIVLFG IRKSLEQIEW VNVVGEFEDS TALINNLPKL 
DAHVLITDLS MPGDKYGDGI TLIKYIKRHF PSLSIIVLTM NNNPAILSAV LDLDIEGIVL
KQGAPTDLPK ALAALQKGKK FTPESVSRLL EKISAGGYGD KRLSPKESEV LRLFAEGFLV
TEIAKKLNRS IKTISSQKKS AMMKLGVEND IALLNYLSSV TLSPADKD