Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A2180 |
Symbol | rfbD |
ID | 5594710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 2158756 |
End bp | 2159646 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640921313 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001458852 |
Protein GI | 157161534 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.15285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTT TACTGATTGG CAAGAATGGC CAGGTGGGCT GGGAACTGCA GCGTTCACTG TCCACCCTCG GCGACGTGGT CGCGGTGGAC TACTTTGACA AAGAGCTGTG CGGCGACCTG ACTAATCTGG AAGGCATCGC GCAGACCGTG CGTACCGTCC GCCCGGATGT GGTGGTGAAT GCCGCCGCGC ACACGGCGGT GGACAAGGCA GAAAGCGAGC GGGAGCTCTC CGACCTGCTG AACGACAAAG GGGTGGCGGT GCTAGCGGCA GAGTCGGCGA AGCTGGGTGC CCTGATGGTG CACTATTCCA CGGATTATGT GTTCGACGGC GCCGGCAGCC ATTATCGCCG GGAAGATGAG GCAACCAGCC CGCTGAACGT CTACGGCGAA ACCAAACGCG CCGGTGAACT GGCCCTGGAG CAGGGTAACC CGCGTCACCT GATTTTCCGT ACCAGCTGGG TGTATGCCAC CCGCGGCGCC AACTTTGCCA AAACCATGCT CCGCCTGGCG GGTGAGAAAG AGACGCTCTC CATCATTGAC GACCAGCACG GGGCGCCCAC CGGCGCTGAG CTGCTGGCAG ACTGCACGGC GATGGCAATC CGTGAAACGT TGCGTAATCC GGCGCTGGCC GGTACCTATC ATCTGGTGGC CAGCGGCGAG ACCAGCTGGT GCGACTACGC CCGCTATGTG TTTGAGGTGG CGAGGGCGCA CGGTGCAGAG CTGGCGGTTC AGGAAGTGAA GGGCATTCCG ACGACGGCCT ATCCGACGCC GGCGAAGCGT CCGCTCAACT CACGCCTGTC GAATGAAAAA TTCCAGCAGG CATTTGGGGT GACTCTCCCG GACTGGCGTC AGGGTGTGGC TCGCGTGGTA ACAGAAGTCC TGGGCAAATA A
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Protein sequence | MKILLIGKNG QVGWELQRSL STLGDVVAVD YFDKELCGDL TNLEGIAQTV RTVRPDVVVN AAAHTAVDKA ESERELSDLL NDKGVAVLAA ESAKLGALMV HYSTDYVFDG AGSHYRREDE ATSPLNVYGE TKRAGELALE QGNPRHLIFR TSWVYATRGA NFAKTMLRLA GEKETLSIID DQHGAPTGAE LLADCTAMAI RETLRNPALA GTYHLVASGE TSWCDYARYV FEVARAHGAE LAVQEVKGIP TTAYPTPAKR PLNSRLSNEK FQQAFGVTLP DWRQGVARVV TEVLGK
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