| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A2114 |
|---|
| Symbol | cobT |
|---|
| ID | 5594700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 2101990 |
|---|
| End bp | 2103069 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640921253 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_001458792 |
|---|
| Protein GI | 157161474 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000000000168624 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC TTGCCGATTT ACTGAATACG ATCCCTGCTA TCGATCCTGC CGCTATGTCG
CGTGCACAAC GGCATATTGA CGGGTTACTC AAACCTGTTG GTAGCCTGGG AAGGCTGGAG
GCGCTTGCCA TACAACTGGC GGGAATGCCG GGGTTGAATG GCATACCGCA TGTGGGCAAA
AAAGCGGTAC TGGTTATGTG TGCCGATCAC GGCGTCTGGG AGGAAGGGGT CGCTATTTCC
CCAAAAGAAG TGACAGCCAT TCAGGCTGAA AATATGACCC GCGGAACAAC CGGCGTGTGT
GTGCTGGCAG CACAAGCGGG CGCTAACGTC CACGTAGTTG ATGTTGGTAT TGATAGTGCT
GAGCCTATCC CCGGGCTTAT CAACATGCGT GTCGCACGAG GTAGCGGCAA TATTGCTTCA
GCTCCGGCAA TGAGTCGCCG TCAGGCTGAA AAGTTGCTTT TGGACGTCAT ATGTTATACG
CGGGAGCTGG CAAAAAACGG TGTCACGCTG TTTGGTGTAG GTGAACTGGG GATGGCAAAC
ACGACACCGG CAGCGGCAAT AGTCAGCACA ATCACTGGCC GGGATCCTGA AGAAGTGGTT
GGGATTGGCG CAAACCTGCC GACAGATAAA CTGGCTAATA AAATTGATGT TGTGCGTCGG
GCGATTACGT TGAATCAACC AAATCCTCAG GATGGTATTG ATGTCCTGGC AAAAGTGGGT
GGATTTGATT TGGTCGGAAT AGCTGGAGTG ATGTTAGGTG CTGCTTCCTG CGGTTTACCC
GTGTTGCTGG ATGGATTTCT TTCTTATGCT GCTGCGCTCG CAGCCTGCCA GATGTCTCCT
GCAATCAAAC CGTATCTCAT TCCTTCTCAC TTGTCGGTAG AAAAAGGCGC GCGTATAGCG
CTCTCGCATT TGGGGCTGGA GCCTTATCTC AATATGGATA TGCGTTTAGG TGAGGGGAGT
GGTGCAGCTC TGGCGATGCC CATCATCGAA GCTGCTTGTG CGATATACAA CAACATGGGC
GAACTTGCTG CCAGTAATAT TGTTCTACCG GGGAATACGA CTTCTGATTT GAACAGCTAA
|
|---|
| Protein sequence | MQTLADLLNT IPAIDPAAMS RAQRHIDGLL KPVGSLGRLE ALAIQLAGMP GLNGIPHVGK
KAVLVMCADH GVWEEGVAIS PKEVTAIQAE NMTRGTTGVC VLAAQAGANV HVVDVGIDSA
EPIPGLINMR VARGSGNIAS APAMSRRQAE KLLLDVICYT RELAKNGVTL FGVGELGMAN
TTPAAAIVST ITGRDPEEVV GIGANLPTDK LANKIDVVRR AITLNQPNPQ DGIDVLAKVG
GFDLVGIAGV MLGAASCGLP VLLDGFLSYA AALAACQMSP AIKPYLIPSH LSVEKGARIA
LSHLGLEPYL NMDMRLGEGS GAALAMPIIE AACAIYNNMG ELAASNIVLP GNTTSDLNS
|
|---|
| |