Gene EcHS_A2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A2045 
SymbolfliM 
ID5593927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp2039827 
End bp2040831 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content53% 
IMG OID640921189 
Productflagellar motor switch protein FliM 
Protein accessionYP_001458734 
Protein GI157161416 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.0461254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGATA GTATTCTTTC TCAAGCTGAA ATTGATGCGC TGTTGAATGG TGACAGCGAA 
GTCAAAGACG AACCGACAGC CAGTGTTAGC GGCGAAAGTG ACATTCGTCC GTACGATCCG
AATACCCAAC GACGGGTTGT GCGCGAACGT TTGCAGGCGC TGGAAATCAT TAATGAGCGC
TTTGCCCGCC ATTTTCGTAT GGGGCTGTTC AACCTGCTGC GCCGTAGCCC AGATATAACC
GTCGGGGCCA TCCGCATTCA GCCGTACCAT GAATTTGCCC GCAACCTGCC GGTGCCGACC
AACCTGAACC TTATCCATCT GAAACCGCTG CGCGGCACAG GGCTGGTGGT GTTTTCACCG
AGTCTGGTGT TTATCGCCGT GGATAACCTG TTTGGCGGCG ATGGACGCTT CCCGACCAAA
GTGGAAGGTC GCGAGTTTAC CCATACCGAA CAGCGCGTCA TCAACCGCAT GTTAAAGCTG
GCGCTTGAAG GCTATAGCGA CGCCTGGAAG GCGATTAATC CGCTGGAAGT TGAGTACGTG
CGTTCGGAAA TGCAGGTGAA ATTTACCAAT ATCACCACCT CGCCGAACGA CATTGTGGTT
AACACGCCGT TCCATGTGGA GATTGGCAAC CTGACCGGCG AATTTAATAT CTGTCTGCCA
TTCAGCATGA TCGAGCCGCT ACGGGAATTG TTGGTTAACC CGCCGCTGGA AAACTCGCGT
AATGAAGATC AGAACTGGCG CGATAACCTG GTGCGCCAGG TGCAGCATTC ACAGCTGGAG
CTGGTCGCCA ACTTTGCCGA TATCTCGCTA CGCCTGTCGC AGATTTTAAA ACTGAAACCC
GGCGACGTCC TGCCGATAGA AAAACCCGAT CGCATCATCG CCCATGTTGA CGGCGTCCCG
GTGCTGACCA GTCAGTACGG CACTCTCAAC GGTCAGTATG CGTTACGGAT AGAACATTTG
ATTAACCCGA TTTTAAATTC TCTGAACGAG GAACAGCCCA AATGA
 
Protein sequence
MGDSILSQAE IDALLNGDSE VKDEPTASVS GESDIRPYDP NTQRRVVRER LQALEIINER 
FARHFRMGLF NLLRRSPDIT VGAIRIQPYH EFARNLPVPT NLNLIHLKPL RGTGLVVFSP
SLVFIAVDNL FGGDGRFPTK VEGREFTHTE QRVINRMLKL ALEGYSDAWK AINPLEVEYV
RSEMQVKFTN ITTSPNDIVV NTPFHVEIGN LTGEFNICLP FSMIEPLREL LVNPPLENSR
NEDQNWRDNL VRQVQHSQLE LVANFADISL RLSQILKLKP GDVLPIEKPD RIIAHVDGVP
VLTSQYGTLN GQYALRIEHL INPILNSLNE EQPK