Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1880 |
Symbol | |
ID | 5591055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1895563 |
End bp | 1896717 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640921022 |
Product | GAF domain/diguanylate cyclase domain-containing protein |
Protein accession | YP_001458574 |
Protein GI | 157161256 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCACT ATTTTTATTA CATTCACTCA AAACATATTA CGTCTTGTTT CATCTTTGTT GATGATGTTT TATCATGCCT GCAAAGATTA AATAATCAGC ATTTACCCGC CGTATCCTGG AGTTGTTCCG TGTCAGATCA GATTATCGCC CGCGTCTCGC AATCCCTTGC CAAAGAACAG TCACTGGAAA GTCTGGTCCG ACAGCTTCTG GAGATGCTGG AAATGGTCAC TGATATGGAA TCAACCTACC TGACCAAAGT GGATGTCGAA GCGCGCCTGC AGCATATTAT GTTTGCCCGT AACAGCCAGA AAATGCACAT CCCGGAGAAT TTTACCGTCT CGTGGGATTA CTCGTTATGC AAACGCGCCA TTGATGAAAA CTGCTTTTTC AGCGATGAAG TCCCCGACCG TTGGGGTGAC TGTATTGCGG CACGCAATCT TGGCATCACC ACATTTCTGA GCACGCCAAT TCACTTACCG GATGGATCAT TCTATGGCAC GCTTTGCGCC GCCAGCAGTG AGAAGCGCCA GTGGAGTGAA CGCGCGGAAC AGGTTTTACA GTTATTCGCC GGACTGATTG CACAATATAT TCAAAAAGAG GCACTGGTTG AACAGCTGCG CGAAGCCAAT GCTGCGCTGA TTGCGCAATC GTATACCGAC TCGTTAACCG GGCTACCGAA TCGGCGGGCG ATTTTTGAAA ATCTGACGAC ACTGTTTTCC CTCGCCCGGC ATCTTAACCA TAAGATAATG ATCGCGTTTA TCGATCTGGA TAACTTCAAA TTAATCAATG ATCGTTTTGG TCATAATAGT GGCGATCTGT TTCTCATTCA GGTTGGCGAG CGCCTTAATA CGCTCCAGCA AAATGGCGAA GTTATTGGTC GTCTCGGCGG TGATGAGTTT TTAGTTGTTT CACTAAACAA CGAGAATGCG GATATTTCGT CGCTGCGAGA ACGCATTCAG CAGCAAATAC GTGGAGAATA TCACTTAGGT GATGTTGATT TGTATTATCC CGGTGCCAGT CTTGGCATAG TAGAAGTCGA TCCTGAAACA ACCGATGCAG ACAGTGCCCT GCATGCTGCC GATATTGCGA TGTATCAGGA GAAAAAACAC AAACAGAAAA CACCTTTTGT CGCGCATCCA GCGCTACATT CCTGA
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Protein sequence | MQHYFYYIHS KHITSCFIFV DDVLSCLQRL NNQHLPAVSW SCSVSDQIIA RVSQSLAKEQ SLESLVRQLL EMLEMVTDME STYLTKVDVE ARLQHIMFAR NSQKMHIPEN FTVSWDYSLC KRAIDENCFF SDEVPDRWGD CIAARNLGIT TFLSTPIHLP DGSFYGTLCA ASSEKRQWSE RAEQVLQLFA GLIAQYIQKE ALVEQLREAN AALIAQSYTD SLTGLPNRRA IFENLTTLFS LARHLNHKIM IAFIDLDNFK LINDRFGHNS GDLFLIQVGE RLNTLQQNGE VIGRLGGDEF LVVSLNNENA DISSLRERIQ QQIRGEYHLG DVDLYYPGAS LGIVEVDPET TDADSALHAA DIAMYQEKKH KQKTPFVAHP ALHS
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