| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1879 |
|---|
| Symbol | |
|---|
| ID | 5590975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1895255 |
|---|
| End bp | 1895509 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640921021 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001458573 |
|---|
| Protein GI | 157161255 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3042] Putative hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TCAGTTTTGT TCTGCCTTGC TTGCTGGTCC TGGCTGGTTG TTCAACCCCT
TCTCAGCCAG AAGCACCTAA ACCGCCGCAG ATTGGTATGG CAAATCCGGC GTCGGTCTAT
TGCCAGCAGA AGGGCGGGAC GCTCATTCCA GTGCAGACAG CGCAAGGGGT CAGCAACAAT
TGCAAATTAC CGGGCGGTGA AACGATTGAT GAATGGGCAT TGTGGCGGCG TGACCATCCG
GCTGGTGAAA AATAA
|
|---|
| Protein sequence | MKIISFVLPC LLVLAGCSTP SQPEAPKPPQ IGMANPASVY CQQKGGTLIP VQTAQGVSNN
CKLPGGETID EWALWRRDHP AGEK
|
|---|
| |