Gene EcHS_A1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1876 
Symbol 
ID5590944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1892732 
End bp1893553 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content50% 
IMG OID640921018 
ProductAraC family transcriptional regulator 
Protein accessionYP_001458570 
Protein GI157161252 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCACA GGTTGAATCT CAATGGCTAT GAACCCGACC GACACCATGA AGCCGCGGTC 
GCATTTTGTA TTCACGCCGG AACGGATGAG TTAACCAGTC CTGTACATCA GCACCGCAAA
GGACAGCTGA TACTGGCGCT ACATGGTGCA ATTACCTGTA CGGTGGAAAA TGCTTTGTGG
ATGGTGCCGC CACAATATGC GGTTTGGATA CCGGGCGGGG TGAAGCATAG CAATCAAGTG
ACAGCTAACG CTGAACTCTG TTTTCTGTTT ATCGAACCCA GCGCAGTGAC AATGCCGACA
ACATGTTGCA CATTGAAAAT ATCGCCCTTA TGCCGGGAAT TGATTTTAAC CCTGGCAAAC
AGGACGACGA CTCAGCGTGC TGAGCCGATG ACCCGCAGAT TAATTCAGGT CCTGTTTGAT
GAACTCCCTC AGCAGCCACA ACAACAGCTG CACCTGCCCG TTTCTTCTCA TCCTAAAATC
CGCACGATGG TGGAGATGAT GGCGAAAGGG CCCGTCGAGT GGGGGTCATT GGGGCAATGG
GCTGGCTTTT TTGCGATGAG TGAACGCAAT CTTGCCCGAC TGATAGTAAA AGAGACGGGG
TTGAGTTTTC GCCAGTGGCG TCAGCAGTTA CAGCTGATTA TGGCGCTTCA GGGATTAGTG
AAAGGCGATA CTGTACAGAA AGTTGCTCAT ACGCTGGGGT ATGATTCAAC AACGGCCTTT
ATTACTATGT TTAAGAAAGG CCTGGGGCAA ACGCCAGGCC GATATATTGC GGGATTAACT
ACTGTTTCCC CACAATCAGC GAAACCAGAC CCGCGGCAAT AA
 
Protein sequence
MMHRLNLNGY EPDRHHEAAV AFCIHAGTDE LTSPVHQHRK GQLILALHGA ITCTVENALW 
MVPPQYAVWI PGGVKHSNQV TANAELCFLF IEPSAVTMPT TCCTLKISPL CRELILTLAN
RTTTQRAEPM TRRLIQVLFD ELPQQPQQQL HLPVSSHPKI RTMVEMMAKG PVEWGSLGQW
AGFFAMSERN LARLIVKETG LSFRQWRQQL QLIMALQGLV KGDTVQKVAH TLGYDSTTAF
ITMFKKGLGQ TPGRYIAGLT TVSPQSAKPD PRQ