Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1876 |
Symbol | |
ID | 5590944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1892732 |
End bp | 1893553 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640921018 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001458570 |
Protein GI | 157161252 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCACA GGTTGAATCT CAATGGCTAT GAACCCGACC GACACCATGA AGCCGCGGTC GCATTTTGTA TTCACGCCGG AACGGATGAG TTAACCAGTC CTGTACATCA GCACCGCAAA GGACAGCTGA TACTGGCGCT ACATGGTGCA ATTACCTGTA CGGTGGAAAA TGCTTTGTGG ATGGTGCCGC CACAATATGC GGTTTGGATA CCGGGCGGGG TGAAGCATAG CAATCAAGTG ACAGCTAACG CTGAACTCTG TTTTCTGTTT ATCGAACCCA GCGCAGTGAC AATGCCGACA ACATGTTGCA CATTGAAAAT ATCGCCCTTA TGCCGGGAAT TGATTTTAAC CCTGGCAAAC AGGACGACGA CTCAGCGTGC TGAGCCGATG ACCCGCAGAT TAATTCAGGT CCTGTTTGAT GAACTCCCTC AGCAGCCACA ACAACAGCTG CACCTGCCCG TTTCTTCTCA TCCTAAAATC CGCACGATGG TGGAGATGAT GGCGAAAGGG CCCGTCGAGT GGGGGTCATT GGGGCAATGG GCTGGCTTTT TTGCGATGAG TGAACGCAAT CTTGCCCGAC TGATAGTAAA AGAGACGGGG TTGAGTTTTC GCCAGTGGCG TCAGCAGTTA CAGCTGATTA TGGCGCTTCA GGGATTAGTG AAAGGCGATA CTGTACAGAA AGTTGCTCAT ACGCTGGGGT ATGATTCAAC AACGGCCTTT ATTACTATGT TTAAGAAAGG CCTGGGGCAA ACGCCAGGCC GATATATTGC GGGATTAACT ACTGTTTCCC CACAATCAGC GAAACCAGAC CCGCGGCAAT AA
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Protein sequence | MMHRLNLNGY EPDRHHEAAV AFCIHAGTDE LTSPVHQHRK GQLILALHGA ITCTVENALW MVPPQYAVWI PGGVKHSNQV TANAELCFLF IEPSAVTMPT TCCTLKISPL CRELILTLAN RTTTQRAEPM TRRLIQVLFD ELPQQPQQQL HLPVSSHPKI RTMVEMMAKG PVEWGSLGQW AGFFAMSERN LARLIVKETG LSFRQWRQQL QLIMALQGLV KGDTVQKVAH TLGYDSTTAF ITMFKKGLGQ TPGRYIAGLT TVSPQSAKPD PRQ
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