Gene EcHS_A1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1825 
Symbolspy 
ID5591694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1843222 
End bp1843707 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content51% 
IMG OID640920969 
Productperiplasmic protein 
Protein accessionYP_001458521 
Protein GI157161203 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAT TAACTGCACT GTTTGTTGCC TCTACCCTGG CTCTTGGCGC GGCTAACCTG 
GCCCATGCCG CAGACACCAC TACCGCAGCA CCGGCTGACG CGAAGCCGAT GATGCACCAC
AAAGGCAAGT TCGGTCCGCA TCAGGACATG ATGTTCAAAG ACCTGAACCT GACCGACGCG
CAGAAACAGC AGATCCGCGA AATCATGAAA GGCCAGCGTG ACCAGATGAA ACGTCCGCCG
CTGGAAGAAC GCCGCGCAAT GCATGACATC ATTGCCAGCG ATACCTTCGA TAAAGTAAAA
GCTGAAGCGC AGATCGCAAA AATGGAAGAA CAGCGCAAAG CTAACATGCT GGCGCACATG
GAAACCCAGA ACAAAATTTA CAACATCCTG ACGCCGGAAC AGAAAAAGCA ATTTAATGCT
AATTTTGAGA AGCGTCTGAC AGAACGTCCA GCGGCAAAAG GTAAAATGCC TGCAACTGCT
GAATAA
 
Protein sequence
MRKLTALFVA STLALGAANL AHAADTTTAA PADAKPMMHH KGKFGPHQDM MFKDLNLTDA 
QKQQIREIMK GQRDQMKRPP LEERRAMHDI IASDTFDKVK AEAQIAKMEE QRKANMLAHM
ETQNKIYNIL TPEQKKQFNA NFEKRLTERP AAKGKMPATA E