Gene EcHS_A1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1817 
SymbolchbR 
ID5591491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1836687 
End bp1837526 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content41% 
IMG OID640920962 
ProductDNA-binding transcriptional regulator ChbR 
Protein accessionYP_001458514 
Protein GI157161196 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.208317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAG TGATTAACGC GCCGGAAATT GCCACTGCCC GAGAACAGCA GTTGTTTAAT 
GGCAAAAACT TCCATGTGTT TATCTATAAC AAAACTGAGA GTATCAGCGG ACTGCATCAG
CACGACTATT ATGAATTTAC TCTGGTATTA ACCGGGCGTT ATTTCCAGGA GATTAACGGT
AAGCGCGTGT TACTGGAACG GGGCGATTTT GTTTTTATTC CGTTAGGTTC GCACCATCAA
AGTTTTTATG AGTTTGGTGC CACGCGCATA TTGAACGTTG GGATCAGTAA ACGCTTTTTT
GAGCAGCATT ACCTGCCATT GTTGCCTTAT TGCTTTGTCG CTTCGCAGGT ATACCGGACC
AATAACGCTT TTCTCACCTA TGTGGAAACA GTGATTTCTT CATTGAATTT CCGCGAAACA
GGGCTGGAAG AGTTTGTTGA GATGGTTACT TTTTATGTCA TTAACCGTTT ACGTCATTAC
CGCGAAGAAC AGGTGATTGA TGATGTACCG CAGTGGCTGA AAAGTACGGT AGAAAAGATG
CATGATAAAG AGCAGTTTAG TGAATCGGCG CTGGAGAATA TGGTGACGTT GTCAGCCAAA
TCACAGGAAT ATTTGACGCG AGCGACTCAA CGATATTATG GCAAAACGCC AATGCAGATT
ATTAATGAAA TCCGTATTAA TTTTGCCAAA AAACAACTGG AAATGACCAA CTATTCAGTG
ACGGATATTG CGTTTGAGGC CGGTTATAGT AGCCCGAGTT TGTTTATTAA AACGTTTAAG
AAATTAACGT CCTTTACGCC TAAGAGCTAT CGTAAGAAAT TGACTGAATT TAATCAGTAA
 
Protein sequence
MQPVINAPEI ATAREQQLFN GKNFHVFIYN KTESISGLHQ HDYYEFTLVL TGRYFQEING 
KRVLLERGDF VFIPLGSHHQ SFYEFGATRI LNVGISKRFF EQHYLPLLPY CFVASQVYRT
NNAFLTYVET VISSLNFRET GLEEFVEMVT FYVINRLRHY REEQVIDDVP QWLKSTVEKM
HDKEQFSESA LENMVTLSAK SQEYLTRATQ RYYGKTPMQI INEIRINFAK KQLEMTNYSV
TDIAFEAGYS SPSLFIKTFK KLTSFTPKSY RKKLTEFNQ