Gene EcHS_A1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1792 
SymbolihfA 
ID5591506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1812054 
End bp1812353 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content50% 
IMG OID640920939 
Productintegration host factor subunit alpha 
Protein accessionYP_001458491 
Protein GI157161173 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.704445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTA CAAAAGCTGA AATGTCAGAA TATCTGTTTG ATAAGCTTGG GCTTAGCAAG 
CGGGATGCCA AAGAACTGGT TGAACTGTTT TTCGAAGAGA TCCGTCGCGC TCTGGAAAAC
GGCGAACAGG TGAAACTCTC TGGTTTTGGT AACTTCGATC TGCGTGATAA GAATCAACGC
CCGGGACGTA ACCCGAAAAC GGGCGAGGAT ATTCCCATTA CAGCACGGCG CGTGGTGACC
TTCAGACCCG GGCAGAAGTT AAAAAGCCGG GTCGAAAACG CTTCGCCCAA AGACGAGTAA
 
Protein sequence
MTLTKAEMSE YLFDKLGLSK RDAKELVELF FEEIRRALEN GEQVKLSGFG NFDLRDKNQR 
PGRNPKTGED IPITARRVVT FRPGQKLKSR VENASPKDE