Gene EcHS_A1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1788 
Symbol 
ID5591656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1809068 
End bp1809532 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID640920935 
ProductNlpC/P60 family lipoprotein 
Protein accessionYP_001458487 
Protein GI157161169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTCT GCCTTATTTT GATCACAGCA CTGTTTCTGG TCGGGTGTAG CCACCATAAA 
GCACCGCCGC CAAATGCCAG ACTTTCTGAT TCGATTACCG TTATTGCCGG TTTGAACGAC
CAGCTACAAA GCTGGCATGG CACGCCGTAT CGTTATGGTG GCATGACGCG GCGCGGTGTG
GACTGTTCGG GATTTGTGGT TGTAACGATG CGCGATCGTT TCGATTTGCA GCTGCCCCGA
GAAACCAAAG AACAAGCCTC TATCGGCACG CAAATTGATA AAGACGAGTT GCTGCCTGGT
GACCTGGTCT TTTTCAAAAC GGGGTCCGGA CAAAATGGTT TGCATGTAGG TATTTACGAT
ACCAACAACC AATTTATCCA CGCCTCTACC AGCAAGGGAG TGATGCGTTC CTCACTTGAT
AATGTCTATT GGCAGAAAAA TTTCTGGCAG GCGAGACGAA TCTAG
 
Protein sequence
MRFCLILITA LFLVGCSHHK APPPNARLSD SITVIAGLND QLQSWHGTPY RYGGMTRRGV 
DCSGFVVVTM RDRFDLQLPR ETKEQASIGT QIDKDELLPG DLVFFKTGSG QNGLHVGIYD
TNNQFIHAST SKGVMRSSLD NVYWQKNFWQ ARRI