Gene EcHS_A1714 details

Gene Information

• Locus tag: EcHS_A1714
• Symbol: pdxH
• ID: 5591124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 1739304
• End bp: 1739960
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640920862
• Product: pyridoxamine 5'-phosphate oxidase
• Protein accession: YP_001458418
• Protein GI: 157161100
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0259] Pyridoxamine-phosphate oxidase
• TIGRFAM ID: [TIGR00558] pyridoxamine-phosphate oxidase

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 0.243328
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGATA ACGACGAATT GCAGCAAATC GCGCATCTGC GCCGTGAATA CACCAAAGGC 
GGGTTACGCC GCCGCGATCT TCCCGCCGAT CCATTAACCC TTTTTGAACG TTGGCTCTCT 
CAGGCTTGTG AAGCCAAACT GGCGGACCCT ACCGCGATGG TGGTCGCTAC CGTGGATGAA 
CATGGTCAGC CTTATCAGCG CATCGTTTTA CTCAAACATT ACGACGAAAA AGGCATGGTG 
TTTTACACCA ACCTCGGCAG CCGTAAAGCA CATCAAATCG AAAATAATCC GCGCGTTAGC 
CTGCTGTTCC CGTGGCATAC CCTTGAGCGC CAGGTGATGG TGATCGGTAA AGCAGAACGA 
CTTTCGACTC TCGAAGTGAT GAAATATTTT CATAGCCGCC CGCGTGATAG CCAGATTGGT 
GCATGGGTTT CGAAGCAGTC CAGTCGCATT TCTGCCCGCG GTATCCTTGA AAGTAAATTC 
CTGGAGCTGA AGCAGAAGTT TCAACAGGGC GAAGTGCCAT TGCCGAGCTT TTGGGGCGGT 
TTTCGCGTCA GCCTTGAACA GATTGAGTTC TGGCAGGGTG GTGAGCATCG CCTGCATGAC 
CGCTTTTTGT ACCAGCGTGA AAATGATGCG TGGAAGATTG ATCGTCTTGC ACCCTGA 

 

Protein sequence

MSDNDELQQI AHLRREYTKG GLRRRDLPAD PLTLFERWLS QACEAKLADP TAMVVATVDE 
HGQPYQRIVL LKHYDEKGMV FYTNLGSRKA HQIENNPRVS LLFPWHTLER QVMVIGKAER 
LSTLEVMKYF HSRPRDSQIG AWVSKQSSRI SARGILESKF LELKQKFQQG EVPLPSFWGG 
FRVSLEQIEF WQGGEHRLHD RFLYQRENDA WKIDRLAP