Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1644 |
Symbol | |
ID | 5593689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1668584 |
End bp | 1669117 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640920792 |
Product | phage lysozyme |
Protein accession | YP_001458348 |
Protein GI | 157161030 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000000011957 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAA AAATCAGATA CAGCCTGTCG GCCGCTGTTC TGGCACTGAT TGCCGCCAGT GCTCCTGCCC CTGACATTCT CGATCAGTTT CTGGATGAAA AAGAGGGGAA TCACACCACT GCATACCGCG ATGGCTCCGG CATATGGACC ATCTGTCGGG GAGCAACGAT GGTGGACGGT AAACCTGTTA TTCCGGGAAT GAAACTGTCG AAGGAAAAAT GCGCCCAGGT TAACGCCATT GAGCGGGATA AGGCGCTGGC ATGGGTGGAG CGCAATATAA AAGTTCCACT GACCGAGCCA CAGAAAGCCG GTATCGCGTC ATTCTGTCCC TATAACATTG GCCCTGGTAA GTGTTTTCCG TCGACGTTTT ATAAGCGGCT TAATGCCGGT GATCGTAAAG GCGCATGCGA GGCGATTCGC TGGTGGATAA AGGACGGTGG ACGTGATTGC CGCATTCGTT CAAATAATTG TTACGGTCAG GTTATTCGGC GTGACCAGGA GAGTGCATTA ACCTGCTGGG GGATAGAACA GTGA
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Protein sequence | MNVKIRYSLS AAVLALIAAS APAPDILDQF LDEKEGNHTT AYRDGSGIWT ICRGATMVDG KPVIPGMKLS KEKCAQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL TCWGIEQ
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