Gene EcHS_A1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1644 
Symbol 
ID5593689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1668584 
End bp1669117 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID640920792 
Productphage lysozyme 
Protein accessionYP_001458348 
Protein GI157161030 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000000011957 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAA AAATCAGATA CAGCCTGTCG GCCGCTGTTC TGGCACTGAT TGCCGCCAGT 
GCTCCTGCCC CTGACATTCT CGATCAGTTT CTGGATGAAA AAGAGGGGAA TCACACCACT
GCATACCGCG ATGGCTCCGG CATATGGACC ATCTGTCGGG GAGCAACGAT GGTGGACGGT
AAACCTGTTA TTCCGGGAAT GAAACTGTCG AAGGAAAAAT GCGCCCAGGT TAACGCCATT
GAGCGGGATA AGGCGCTGGC ATGGGTGGAG CGCAATATAA AAGTTCCACT GACCGAGCCA
CAGAAAGCCG GTATCGCGTC ATTCTGTCCC TATAACATTG GCCCTGGTAA GTGTTTTCCG
TCGACGTTTT ATAAGCGGCT TAATGCCGGT GATCGTAAAG GCGCATGCGA GGCGATTCGC
TGGTGGATAA AGGACGGTGG ACGTGATTGC CGCATTCGTT CAAATAATTG TTACGGTCAG
GTTATTCGGC GTGACCAGGA GAGTGCATTA ACCTGCTGGG GGATAGAACA GTGA
 
Protein sequence
MNVKIRYSLS AAVLALIAAS APAPDILDQF LDEKEGNHTT AYRDGSGIWT ICRGATMVDG 
KPVIPGMKLS KEKCAQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP
STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL TCWGIEQ