| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1619 |
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| Symbol | |
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| ID | 5593529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1640616 |
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| End bp | 1641929 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640920767 |
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| Product | PTS system lactose/cellobiose family IIC subunit |
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| Protein accession | YP_001458323 |
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| Protein GI | 157161005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
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| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.711166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCAT TCGAACGTGG AATGGAACGT TTTCTTGTTC CAGTTGCTAT CAAGTTAAAC
TCACAAAAAC ATGTTGCAGC GGTGAGAGAT GGATTCGTTT TTACGTTTCC AATTATCATG
GCAAGTTCAT TAATTATATT AATTAACTTT GCCATATTAT CGCCAGACGG TTTTATTGCC
GGATTACTGC ATCTGAATAG CATTTTCCCC AACCTTGAAA AAGCACAAGC TATTTTTACT
CCGGTAATGA ATGGTTCTGT AAATATCATG TCAATTATGA TTGCTTTCCT GGTCGCCAGG
AATATGGCGA TTAGCTATGA GCAAGATGAT CTTTTATGCG GATTAACGGC AATAGGAGCA
TTTTTTATTG TTTATACGCC ATATCAGATG ATAGATGGGC AAGCATTCCT GACGACCAAA
TATCTCGGCG CGCAGGGGTT GTTTGTTGCT GTTATCGTTG CATTGATCAC CAGTGAAATA
TTTTGTCGCT TAGCTCGAAA CCCAAAAATC ACCATAACGA TGCCGGCAGC TGTACCGCCT
GCGGTAGCGC GTTCATTTAA AGTTTTATTG CCAATATTTT TTGTCATGGT GTTCTTTTCC
GCACTTAATT ATTGCCTGAC ACTGATATCC CCGGCAGGAC TAAACGATCT TATTTACACA
TTAATCCAGA CGCCGCTCAA ACATATGGGA ACGAATATCT TTGCGGTAAT TATCCTGGGG
GCTGTGGGTA ATTTCCTGTG GGTGCTGGGG ATCCACGGAC CTAATACCAC ATCGGCAATT
CGAGAAACCG TTTTTTCTGA GGCTAATCTG GAGAATCTCT CCTGGGCCGC TCAACATGGC
ACTACCTGGG GCGCGCCATA TCCGATTACC TGGACTTCTA TTAATGATGC ATTCGCCAAC
TGCGGCGGTT CAGGTATGAC GTTGGGGTTA TTGTTGGCTA TTTTTATCGC TTCTAAGCGT
GCGGAATACC GTGATCTGGC AAAAATGTCA TTTATCCCCG GTATTTTCAA TATCAATGAA
CCGATAATGT TTGGCCTTCC TATTGTACTT AACCCCATCA TGATGGTGCC GTTTATTATG
GTTCCCATTG TTAACTGTGC CATTGGTTAC TTCTTTGTTT CGATGGAAAT TATTTCACCG
GTTGCTTATG CCGTGCCCTG GACTACGCCC GGACCTTTAA TTGCTTTCCT CGGAACCGGG
GGGAACTGGC TGGCTTTACT GGTTGGTTTT TTATGTTTAG GTGTGGCGAC AATGATCTAT
TTACCTTTTG TTATTGCCGC CAACAAAGTC AATAACATGA CAACTAACGG ATAA
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| Protein sequence | MASFERGMER FLVPVAIKLN SQKHVAAVRD GFVFTFPIIM ASSLIILINF AILSPDGFIA
GLLHLNSIFP NLEKAQAIFT PVMNGSVNIM SIMIAFLVAR NMAISYEQDD LLCGLTAIGA
FFIVYTPYQM IDGQAFLTTK YLGAQGLFVA VIVALITSEI FCRLARNPKI TITMPAAVPP
AVARSFKVLL PIFFVMVFFS ALNYCLTLIS PAGLNDLIYT LIQTPLKHMG TNIFAVIILG
AVGNFLWVLG IHGPNTTSAI RETVFSEANL ENLSWAAQHG TTWGAPYPIT WTSINDAFAN
CGGSGMTLGL LLAIFIASKR AEYRDLAKMS FIPGIFNINE PIMFGLPIVL NPIMMVPFIM
VPIVNCAIGY FFVSMEIISP VAYAVPWTTP GPLIAFLGTG GNWLALLVGF LCLGVATMIY
LPFVIAANKV NNMTTNG
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