Gene EcHS_A1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1544 
Symbol 
ID5591277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1549039 
End bp1549830 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content39% 
IMG OID640920698 
ProductISEc1, transposase 
Protein accessionYP_001458254 
Protein GI157160936 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.59802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG 
AAAGTGGAAC ATAAATTATC GGATATTCTA CTGTTAACTA TTTGTGCCGT TATTTCTGGT
GCAGAGGGTT GGGAAGATAT AGAGGATTTT GGGGAAATAC ATCTCGATTT TTTGAAGCAA
TATGGTGATT TTGAAAATGG TATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT
ATCAGTCCTG CAAAATTTCA CGAGTGCTTT ATTAACTGGA TGCGTGATTG TCATTCTTCA
GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCATTCTTA TGATAAGAGT
CGCCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC
GGACAGATCA AGACGGATGA TAAATCTAAT GAGATTACAG CTATCCCAGA ACTTCTTAAC
ATGCTGGATA TTAAAGGAAA AATCATCACA ACTGATGCGA TGGGTTGCCA GAAAGATATA
GCAGAGAAGA TACAAAAACA GGGAGGTGAT TATTTATTCG CGGTGAAAGG AAACCAGGGG
TGGCTAAATA AAGTCTTTGA GGAAAAGTTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT
GACAGTTACG CAATTTGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTAT TCATATTGTT
TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGACT GAAAATTCAC
AATGTGTGTT AA
 
Protein sequence
MELKKLMEHI SIIPDYRQAW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GEIHLDFLKQ 
YGDFENGIPV HDTIARVVSC ISPAKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS
RRRGAIHVIS AFSTMHSLVI GQIKTDDKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI
AEKIQKQGGD YLFAVKGNQG WLNKVFEEKF PLKELNNPEH DSYAICEKSH GREEIRIHIV
CDVPDELIDF TFEWKGLKIH NVC