| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1528 |
|---|
| Symbol | ydcW |
|---|
| ID | 5593192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1536008 |
|---|
| End bp | 1537432 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640920683 |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | YP_001458239 |
|---|
| Protein GI | 157160921 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATA AGTTACTGAT TAACGGAGAA CTGGTTAGCG GCGAAGGGGA AAAACAGCCT
GTCTATAATC CGGCAACGGG GGACGTTTTA CTGGAAATTG CCGAGGCATC CGCAGAGCAG
GTCGATGCTG CTGTGCGCGC GGCAGATGCA GCATTTGCCG AATGGGGGCA AACCACGCCG
AAAGTGCGTG CGGAATGTCT GCTGAAACTG GCTGATGTTA TCGAAGAAAA TGGTCAGGTT
TTTGCCGAAC TGGAGTCCCG TAATTGTGGC AAACCGCTGC ATAGTGCGTT CAATGATGAA
ATCCCGGCGA TTGTCGATGT TTTTCGCTTT TTCGCGGGTG CGGCGCGCTG TCTGAATGGT
CTGGCGGCAG GTGAATATCT TGAAGGTCAT ACTTCGATGA TCCGTCGCGA TCCGTTGGGG
GTCGTGGCTT CTATCGCACC GTGGAATTAT CCGCTGATGA TGGCCGCGTG GAAACTTGCT
CCGGCGCTGG CGGCAGGGAA CTGCGTAGTG CTTAAACCAT CAGAAATTAC CCCGCTGACC
GCGTTGAAGT TGGCAGAGCT GGCGAAAGAT ATCTTCCCGG CAGGCGTGAT TAACATACTG
TTTGGCAGAG GCAAAACGGT GGGTGATCCG CTGACCGGTC ATCCCAAAGT GCGGATGGTG
TCGCTGACGG GCTCTATCGC TACCGGCGAG CACATCATCA GCCATACCGC GTCGTCCATT
AAGCGTACTC ATATGGAACT TGGTGGCAAA GCGCCAGTGA TTGTTTTTGA TGATGCGGAT
ATTGAAGCAG TGGTCGAAGG TGTACGTACA TTTGGCTATT ACAATGCTGG ACAGGATTGT
ACTGCGGCTT GTCGGATCTA CGCGCAAAAA GGCATTTACG ATACGCTGGT GGAAAAACTG
GGTGCTGCGG TGGCAACGTT AAAATCTGGT GCGCCGGATG ACGAGTCTAC GGAGCTTGGA
CCTTTAAGCT CGCTGGCGCA TCTCGAACGC GTCAGCAAGG CAGTAGAAGA GGCGAAAGCG
ACAGGGCACA TCAAAGTGAT CACTGGCGGT GAAAAGCGCA AGGGTAATGG CTATTACTAT
GCGCCGACGC TGCTGGCTGG CGCATTACAG GACGATGCCA TCGTGCAAAA AGAGGTATTT
GGTCCAGTAG TGAGTGTTAC GCTCTTCGAC AACGAAGAAC AGGTGGTGAA CTGGGCGAAT
GACAGCCAGT ACGGACTTGC ATCTTCGGTA TGGACGAAAG ATGTGGGCAG GGCGCATCGC
GTCAGCGCAC GGCTGCAATA TGGTTGTACT TGGGTCAATA CCCATTTCAT GCTGGTAAGT
GAAATGCCGC ACGGTGGACA GAAACTTTCT GGTTACGGCA AGGATATGTC ACTTTATGGG
CTGGAGGATT ACACCGTCGT CCGCCACGTC ATGGTTAAAC ATTAA
|
|---|
| Protein sequence | MQHKLLINGE LVSGEGEKQP VYNPATGDVL LEIAEASAEQ VDAAVRAADA AFAEWGQTTP
KVRAECLLKL ADVIEENGQV FAELESRNCG KPLHSAFNDE IPAIVDVFRF FAGAARCLNG
LAAGEYLEGH TSMIRRDPLG VVASIAPWNY PLMMAAWKLA PALAAGNCVV LKPSEITPLT
ALKLAELAKD IFPAGVINIL FGRGKTVGDP LTGHPKVRMV SLTGSIATGE HIISHTASSI
KRTHMELGGK APVIVFDDAD IEAVVEGVRT FGYYNAGQDC TAACRIYAQK GIYDTLVEKL
GAAVATLKSG APDDESTELG PLSSLAHLER VSKAVEEAKA TGHIKVITGG EKRKGNGYYY
APTLLAGALQ DDAIVQKEVF GPVVSVTLFD NEEQVVNWAN DSQYGLASSV WTKDVGRAHR
VSARLQYGCT WVNTHFMLVS EMPHGGQKLS GYGKDMSLYG LEDYTVVRHV MVKH
|
|---|
| |