| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1486 |
|---|
| Symbol | paaX |
|---|
| ID | 5591576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1486732 |
|---|
| End bp | 1487682 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640920643 |
|---|
| Product | phenylacetic acid degradation operon negative regulatory protein PaaX |
|---|
| Protein accession | YP_001458199 |
|---|
| Protein GI | 157160881 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
|---|
| TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAC TTGATACTTT TATCCAACAT GCTGTAAACG CTGTTCCGGT CAGTGGCACA
TCTTTGATCT CCTCTCTGTA TGGTGATTCG CTTTCCCATC GTGGTGGTGA AATCTGGCTT
GGTAGTCTGG CTGCTTTGCT GGAAGGGCTG GGATTTGGTG AGCGTTTCGT GCGCACCGCT
TTGTTTCGTC TTAATAAAGA AGGCTGGCTG GATGTTTCCC GCATCGGGCG ACGCAGTTTC
TATAGCCTCA GTGATAAAGG CTTGCGCCTG ACGCGACGGG CAGAAAGTAA AATTTATCGC
GCAGAGCAAC CTGCATGGGA TGGTAAATGG CTCCTGTTGC TCTCGGAAGG TTTAGATAAA
GCGACGCTGG CTGATGTCAA AAAGCAGTTG ATCTGGCAAG GTTTTGGCGC ACTGGCACCC
AGCCTGATGG CATCGCCGTC GCAAAAACTG GCGGATGTAC AGACACTTTT GCATGAAGCG
GGGGTGGCGG ATAACGTGAT TTGTTTTGAA GCGCAAATAC CACTGGCGCT TTCTCGCGCA
GCACTGCGTG CCAGAGTAGA AGAGTGCTGG CATTTAACTG AACAAAATGC CATGTACGAA
ACCTTTATTC AGTCATTCCG CCCGCTGGTG CCGCTGTTAA AAGAGACGGC AGACGAGTTA
ACCCCGGAGC GTGCATTTCA TATTCAGCTT TTACTGATCC ATTTTTATCG CCGTGTCGTC
CTTAAAGACC CATTGTTGCC GGAGGAGTTG CTTCCGGCTC ACTGGGCAGG GCATACGGCG
CGTCAGCTGT GTATCAACAT TTATCAGCGC GTAGCGCCTG CTGCTTTAGC GTTCGTTAGT
GAAAAAGGTG AAACCTCAGT CGGTGAACTG CCTGCGCCGG GAAGCCTGTA TTTTCAACGT
TTTGGCGGCT TGAATATTGA ACAGGAGGCG TTATGCCAAT TTACCAGATA G
|
|---|
| Protein sequence | MSKLDTFIQH AVNAVPVSGT SLISSLYGDS LSHRGGEIWL GSLAALLEGL GFGERFVRTA
LFRLNKEGWL DVSRIGRRSF YSLSDKGLRL TRRAESKIYR AEQPAWDGKW LLLLSEGLDK
ATLADVKKQL IWQGFGALAP SLMASPSQKL ADVQTLLHEA GVADNVICFE AQIPLALSRA
ALRARVEECW HLTEQNAMYE TFIQSFRPLV PLLKETADEL TPERAFHIQL LLIHFYRRVV
LKDPLLPEEL LPAHWAGHTA RQLCINIYQR VAPAALAFVS EKGETSVGEL PAPGSLYFQR
FGGLNIEQEA LCQFTR
|
|---|
| |