Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1463 |
Symbol | ompN |
ID | 5591697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1458952 |
End bp | 1460085 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640920619 |
Product | outer membrane protein N |
Protein accession | YP_001458176 |
Protein GI | 157160858 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.510785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCA AAGTACTGGC ACTTTTAATT CCTGCCCTGC TCGCCGCAGG TGCTGCACAT GCAGCCGAAG TTTATAATAA AGACGGCAAC AAATTAGATC TGTATGGCAA AGTTGATGGC CTGCATTATT TTTCTGATAA TTCAGCGAAA GATGGCGACC AGAGCTATGC GCGTCTGGGT TTTAAAGGCG AAACCCAAAT TAACGATCAA CTCACTGGCT ACGGTCAATG GGAATACAAT ATTCAGGCAA ACAACACTGA ATCTTCAAAA AACCAGTCAT GGACCCGTCT GGCATTTGCC GGGCTGAAAT TTGCAGATTA CGGTTCTTTC GATTACGGAC GTAATTATGG CGTAATGTAC GACATCGAAG GCTGGACCGA TATGCTGCCT GAATTTGGCG GTGACTCTTA TACCAATGCA GACAACTTTA TGACTGGTCG AGCCAATGGC GTCGCGACTT ATCGTAATAC TGATTTCTTC GGTCTGGTAA ATGGTCTGAA CTTCGCGGTG CAGTATCAAG GTAACAACGA AGGAGCCAGT AATGGTCAGG AAGGCACCAA CAACGGACGT GATGTTCGCC ATGAAAACGG TGACGGCTGG GGTCTTTCCA CAACATATGA TTTAGGCATG GGCTTTAGCG CTGGTGCGGC ATACACCTCT TCTGACCGCA CCAATGACCA GGTTAACCAT ACTGCGGCGG GTGGTGATAA AGCAGACGCG TGGACTGCTG GGCTAAAATA CGATGCTAAC AATATTTACC TGGCAACCAT GTATTCAGAA ACGCGTAATA TGACCCCGTT TGGCGACAGC GATTATGCTG TGGCAAACAA AACCCAGAAT TTTGAAGTCA CTGCACAGTA CCAGTTTGAT TTTGGTCTGC GTCCGGCAGT CTCTTTCCTG ATGTCTAAAG GCCGTGACCT GCACGCTGCG GGTGGTGCAG ACAACCCGGC AGGTGTTGAT GATAAAGATC TGGTTAAATA CGCCGATGTT GGCGCGACTT ACTATTTCAA TAAAAACATG TCCACCTACG TTGACTATAA AATCAACCTG TTGGATGAAG ATGACAGCTT CTACGCTGCC AATGGCATCT CTACCGATGA TATTGTCGCT TTAGGTCTGG TTTATCAGTT CTAA
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Protein sequence | MKSKVLALLI PALLAAGAAH AAEVYNKDGN KLDLYGKVDG LHYFSDNSAK DGDQSYARLG FKGETQINDQ LTGYGQWEYN IQANNTESSK NQSWTRLAFA GLKFADYGSF DYGRNYGVMY DIEGWTDMLP EFGGDSYTNA DNFMTGRANG VATYRNTDFF GLVNGLNFAV QYQGNNEGAS NGQEGTNNGR DVRHENGDGW GLSTTYDLGM GFSAGAAYTS SDRTNDQVNH TAAGGDKADA WTAGLKYDAN NIYLATMYSE TRNMTPFGDS DYAVANKTQN FEVTAQYQFD FGLRPAVSFL MSKGRDLHAA GGADNPAGVD DKDLVKYADV GATYYFNKNM STYVDYKINL LDEDDSFYAA NGISTDDIVA LGLVYQF
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