Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1297 |
Symbol | |
ID | 5593598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1292232 |
End bp | 1292966 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640920454 |
Product | putative type IV pilus assembly protein PilZ |
Protein accession | YP_001458015 |
Protein GI | 157160697 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.396022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCATT ACCATGAGCA GTTCCTGAAA CAAAATCCGT TAGCCGTCCT GGGCGTGTTA CGCGATTTGC ACAAAGCCGC AATTCCTTTG CGTCTCAGTT GGAATGGCGG GCAGCTGATC AGCAAAATAC TGGCAATAAC CCCGGATAAA CTGGTGCTGG ATTTCGGCAG TCAAGCCGAA GACAACATCG CCGTGCTAAA GGCACAGCAC ATTACCATTA CCGCCGAAAC TCAGGGTGCG AAAGTCGAGT TTACTGTTGA ACAACTACAG CAGAGTGAAT ACTTGCAGCT TCCGGCATTT ATCACCGTAC CGCCTCCCAC CTTATGGTTT GTACAACGAC GCCGATATTT CCGCATCTCC GCCCCACTCC ATCCGCCTTA TTTTTGCCAG ACCAAACTGG CGGATAACAG TACGTTACGT TTCCGCCTGT ATGATTTGTC GTTAGGCGGC ATGGGCGCAT TACTGGAAAC AGCAAAGCCT GCCGAATTAC AAGAAGGCAT GCGCTTCGCT CAGATTGAAG TCAACATGAG GCAATGGGGT GTTTTTCACT TTGACGCCCA GTTAATCTCC ATCAGCGAGC GCAAAGTGAT TGATGGCAAG AATGAAACCA TCACCACTCC CCGTCTGAGC TTCCGTTTTC TTAACGTCAG CCCGACGGTG GAGCGGCAAT TACAGCGGAT TATTTTCTCT CTCGAGCGAG AAGCCCGGGA AAAAGCGGAC AAAGTGCGCG ACTGA
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Protein sequence | MSHYHEQFLK QNPLAVLGVL RDLHKAAIPL RLSWNGGQLI SKILAITPDK LVLDFGSQAE DNIAVLKAQH ITITAETQGA KVEFTVEQLQ QSEYLQLPAF ITVPPPTLWF VQRRRYFRIS APLHPPYFCQ TKLADNSTLR FRLYDLSLGG MGALLETAKP AELQEGMRFA QIEVNMRQWG VFHFDAQLIS ISERKVIDGK NETITTPRLS FRFLNVSPTV ERQLQRIIFS LEREAREKAD KVRD
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