| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1230 |
|---|
| Symbol | nagZ |
|---|
| ID | 5592036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1227775 |
|---|
| End bp | 1228800 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640920390 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_001457952 |
|---|
| Protein GI | 157160634 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.644822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCCAG TAATGTTGGA TGTCGAAGGT TACGAACTGG ACGCGGAAGA GCGTGAAATA
CTGGCGCATC CGCTGGTGGG AGGGCTGATT CTCTTTACGC GTAACTATCA TGATCCTGCC
CAGTTACGTG AACTGGTGCG CCAGATCCGC GCAGCTTCGC GCAATCATCT GGTGGTGGCG
GTTGATCAGG AAGGTGGACG CGTGCAGCGT TTTCGTGAAG GTTTTACCCG CTTGCCAGCG
GCGCAATCAT TCGCTGCGCT GTCAGGAATG GAAGAGGGTG GCAAACTGGC GCAGGAGGCA
GGTTGGTTGA TGGCCAGCGA AATGATCGCT ATGGATATTG ATATCAGCTT TGCGCCTGTG
CTGGATGTCG GGCATATCAG CGCGGCGATT GGCGAGCGTT CTTATCATGC CGATCCACAA
AAAGCCCTGG CAATTGCCAG CCGGTTTATT GATGGTATGC ATGAAGCCGG AATGAAAACG
ACCGGGAAAC ACTTCCCAGG ACACGGTGCA GTAACGGCAG ACTCACACAA AGAAACACCG
TGCGATCCAC GTCCACAAGC GGAGATTCGC GCTAAAGATA TGTCGGTCTT CAGTTCCTTA
ATCCGCGAAA ATAAACTCGA CGCCATTATG CCTGCGCATG TGATCTACAG TGATGTTGAT
CCGCGTCCGG CGAGCGGTTC TCCCTACTGG CTGAAAACCG TTTTGCGTCA GGAACTGGGT
TTTGACGGCG TGATTTTCTC TGACGATTTA TCGATGGAAG GTGCCGTGAT TATGGGCAGT
TATGCCGAAC GCGGGCAGGC ATCACTGGAT GCGGGTTGCG ATATGATCCT GGTCTGCAAT
AATCGTAAAG GGGCCGTCAG CGTGTTAGAT AATCTGTCAC CGATCAAGGC AGAACGTGTT
ACACGTTTGT ATCATAAAGG TTCATTTTCG CGACAGGAAC TGATGGACTC GGCTCGCTGG
AAAGCGATCA GCGCCCGTCT GAATCAGTTA CATGAACGCT GGCAGGAAGA GAAAGCAGGT
CACTAA
|
|---|
| Protein sequence | MGPVMLDVEG YELDAEEREI LAHPLVGGLI LFTRNYHDPA QLRELVRQIR AASRNHLVVA
VDQEGGRVQR FREGFTRLPA AQSFAALSGM EEGGKLAQEA GWLMASEMIA MDIDISFAPV
LDVGHISAAI GERSYHADPQ KALAIASRFI DGMHEAGMKT TGKHFPGHGA VTADSHKETP
CDPRPQAEIR AKDMSVFSSL IRENKLDAIM PAHVIYSDVD PRPASGSPYW LKTVLRQELG
FDGVIFSDDL SMEGAVIMGS YAERGQASLD AGCDMILVCN NRKGAVSVLD NLSPIKAERV
TRLYHKGSFS RQELMDSARW KAISARLNQL HERWQEEKAG H
|
|---|
| |