Gene EcHS_A1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1200 
SymbolflgF 
ID5592588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1197482 
End bp1198237 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content59% 
IMG OID640920359 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001457922 
Protein GI157160604 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACG CAATTTATAC CGCGATGGGA GCAGCCAGCC AGACGCTGAA TCAACAGGCG 
GTAACCGCCA GTAATCTGGC CAATGCCTCA ACGCCCGGTT TTCGCGCGCA GTTAAACGCC
TTGCGTGCAG TGCCGGTGGA AGGGCTTTCA CTGCCTACGC GCACGCTGGT AACGGCGTCA
ACACCGGGTG CAGACATGAC GCCCGGCAAG ATGGATTACA CCTCGCGCCC GCTGGACGTT
GCGTTGCAGC AGGATGGCTG GCTGGCCGTG CAGACCGCTG ACGGCAGCGA AGGGTATACG
CGTAATGGCA GCATTCAGGT TGATCCCACC GGGCAACTGA CAATTCAGGG GCATCCGGTG
ATAGGCGAGG CGGGGCCAAT TGCTGTGCCG GAAGGGGCGG AAATCACTAT TGCTGCCGAT
GGCACAATCT CGGCGCTCAA TCCGGGCGAT CCGGTAAATA CGGTTGCGCC AGTGGGGCGT
CTGAAACTGG TGAAAGCCAC GGGCAGCGAA GTGCAACGCG GTGACGACGG CATTTTTCGT
TTAAGCGCAG AAAGCCAGGC CACGCGTGGG CCGATACTGC AGGCAGATCC AACCTTGCGT
GTGATGTCGG GGGTTCTGGA AGGCAGTAAC GTCAATGCCG TTGCGGCAAT GAGCGACATG
ATTGCCAGCG CGCGGCGTTT TGAAATGCAG ATGAAGGTGA TCAGCAGCGT CGATGATAAC
GCAGGCCGTG CCAACCAACT GCTGTCGATG AGTTAA
 
Protein sequence
MDHAIYTAMG AASQTLNQQA VTASNLANAS TPGFRAQLNA LRAVPVEGLS LPTRTLVTAS 
TPGADMTPGK MDYTSRPLDV ALQQDGWLAV QTADGSEGYT RNGSIQVDPT GQLTIQGHPV
IGEAGPIAVP EGAEITIAAD GTISALNPGD PVNTVAPVGR LKLVKATGSE VQRGDDGIFR
LSAESQATRG PILQADPTLR VMSGVLEGSN VNAVAAMSDM IASARRFEMQ MKVISSVDDN
AGRANQLLSM S